Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001026875.1 | Gene: | CT55 / 54967 | HGNCID: | 26047 | Length: | 264 | Species: | Homo sapiens |
Alignment Length: | 285 | Identity: | 56/285 - (19%) |
---|---|---|---|
Similarity: | 102/285 - (35%) | Gaps: | 83/285 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 279 YEKTFGPLVRLEAEYDQKLKESATQ----ENIEVRW--DVGLNKKTIAYFTLAKTDSDMKLMHGD 337
Fly 338 ELRL-------HYVGELYNPWSEIG-HVIKVPDNFGDDVGLEL------KSSTNAPVKCTSNFTV 388
Fly 389 DFIWKCTSFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGP--QPKLFSAPHLPD 451
Fly 452 LNRSQVYAVK--HALQRPLSLIQGPPGTGKTVTSATIVYQL--VKLHGGTVLVCAPSNTAVDQLT 512
Fly 513 EKIHRTNLKVVRVCAKSREAIDSPV 537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
DNA2 | 122..897 | CDD:224037 | 56/285 (20%) | ||
Mis12 | 210..299 | CDD:283509 | 6/19 (32%) | ||
AAA_19 | 458..>515 | CDD:289986 | 13/60 (22%) | ||
AAA_12 | 661..857 | CDD:289832 | |||
CT55 | NP_001026875.1 | S1-like | 41..>78 | CDD:316926 | 7/37 (19%) |
S1-like | 182..233 | CDD:316926 | 13/64 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 242..264 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |