Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996198.2 | Gene: | CG31368 / 41437 | FlyBaseID: | FBgn0051368 | Length: | 1486 | Species: | Drosophila melanogaster |
Alignment Length: | 913 | Identity: | 194/913 - (21%) |
---|---|---|---|
Similarity: | 336/913 - (36%) | Gaps: | 310/913 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 FIPAKADSVVVLLCRQPCAAQNSLKDMNW----DQEQWKPLI--ADRCFLAWLVKQPSEQGQLRA 231
Fly 232 RQISAAQINKLEELWKENIEATFQDLEKPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQK 296
Fly 297 LKESATQENIEVRWDVGLNKKTIAYFTLAKTD-------SDMKLMHGDELRLHYVG--------E 346
Fly 347 LYNPWSEIGHV----------IKVP-DN-------FGDDVGLELKSSTNAPVKCTSNFTVDFIWK 393
Fly 394 CTSFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFRGP----QPKLFSAPHLPDLNR 454
Fly 455 SQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLH-GGTVLVCAPSNTAVDQLTEKIHRT 518
Fly 519 NL---KVVRVCAKSREAIDSPVSFLALHNQI-----RNMETNSELKKLQQLKDETGE-------- 567
Fly 568 ----------------------LSSADEKRYR--------------------------------- 577
Fly 578 --NLK------------RAAE----------NQLLEAADVICCTCVGAGDGRLSRV----KFTSI 614
Fly 615 LIDESMQSTEPECMVPVVL--------GAKQLILVGDHCQLGPVVMCKKAA---RAGLSQSLFER 668
Fly 669 LVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCA--EDRRLKLDFPWPQPERPMFFLVT 731
Fly 732 QG---------QEEIAGSGTS------FLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRA 781
Fly 782 YLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRA 846
Fly 847 KFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQK-PKKLVNSMNIGAHFM 910
Fly 911 STI 913 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | 16/81 (20%) |
DNA2 | 122..897 | CDD:224037 | 191/895 (21%) | ||
Mis12 | 210..299 | CDD:283509 | 16/90 (18%) | ||
AAA_19 | 458..>515 | CDD:289986 | 21/57 (37%) | ||
AAA_12 | 661..857 | CDD:289832 | 55/212 (26%) | ||
CG31368 | NP_996198.2 | Aquarius_N | 33..815 | CDD:293008 | 57/317 (18%) |
AAA_11 | 818..1123 | CDD:289831 | 68/308 (22%) | ||
AAA_19 | 821..893 | CDD:289986 | 24/72 (33%) | ||
DNA2 | <1012..1348 | CDD:224037 | 93/366 (25%) | ||
UvrD_C_2 | 1131..1321 | CDD:304668 | 54/209 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45438987 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR10887 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |