Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001188923.1 | Gene: | CG6701 / 36550 | FlyBaseID: | FBgn0033889 | Length: | 1333 | Species: | Drosophila melanogaster |
Alignment Length: | 757 | Identity: | 201/757 - (26%) |
---|---|---|---|
Similarity: | 309/757 - (40%) | Gaps: | 185/757 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 266 PAHVL--LRYEDGY--------QYEKTFGPLVRLEAEYDQKLKESATQENIEVRWDVGLNKKTIA 320
Fly 321 YFTLAKTDSDMKLMH-----GDELRLHYVGELYNPWSEIGHV-IKVPD--NFGDDVGL------- 370
Fly 371 ------ELKSSTNAPVKCTSNFTVDFIW------KCTSFDRMTRA---------------LCKFA 408
Fly 409 IDRNSVSNFIYSRL-------------LGHGRADSNDEVLFRGPQPKLFSAPHLPDLNR------ 454
Fly 455 -SQVYAVKH-----ALQRPLSLIQGPPGTGKTVTSATIVYQLV----KLHGGTVLVCAPSNTAVD 509
Fly 510 QLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEK 574
Fly 575 RYRNLKRAAENQLLEAAD---VICCTCVGAG----DGRLSRVKFTSILIDESMQSTEPECMVPVV 632
Fly 633 LGAK---QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLE--------VQ---- 682
Fly 683 --YRMHPELSQFPSNFFYEGSLQNG-----VCAEDRRLKLDFPWPQPERPMFFLVTQGQEEIAGS 740
Fly 741 GTSFLNRTEAANVEKITTRFLKAGIKPEQ-----IGIITPYEGQRAYLVQYMQYQGSLHSRLYQE 800
Fly 801 IEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLW 865
Fly 866 NHLLNFYKDRKVLV-EGSLNNLKESLIHFQKPKKLVNSMNIG 906 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
DNA2 | 122..897 | CDD:224037 | 197/746 (26%) | ||
Mis12 | 210..299 | CDD:283509 | 9/42 (21%) | ||
AAA_19 | 458..>515 | CDD:289986 | 25/65 (38%) | ||
AAA_12 | 661..857 | CDD:289832 | 73/219 (33%) | ||
CG6701 | NP_001188923.1 | TIGR00376 | 424..1037 | CDD:273041 | 171/653 (26%) |
AAA_19 | 618..687 | CDD:289986 | 28/79 (35%) | ||
AAA_12 | 812..1019 | CDD:289832 | 73/219 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45438981 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D27889at6960 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000219 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.750 |