Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_033238.2 | Gene: | Ighmbp2 / 20589 | MGIID: | 99954 | Length: | 993 | Species: | Mus musculus |
Alignment Length: | 760 | Identity: | 220/760 - (28%) |
---|---|---|---|
Similarity: | 319/760 - (41%) | Gaps: | 172/760 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 289 LEAEYDQKLKESAT-QENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGELYNPWS 352
Fly 353 EIGHVIKVPDN---FGDDVGLELKSSTNAPVKCTSNFTVDFIWKCT------SFDRM-------- 400
Fly 401 ---TRALCKFAIDRNSVSNFIYSRL---------LGHGRADSNDEVLFRG--PQPKLFSAP---H 448
Fly 449 LPDLNRSQVYAVKHAL-QRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLT 512
Fly 513 EKIHRTNLKVVRVCAKSR--EAIDSPVSFLALHNQIRNMETNSELK----------KLQQLKDET 565
Fly 566 GELSSADE---KRYRNLKRAAENQLLEAADVICCTCVGA-GDGRLSRVK---FTSILIDESMQST 623
Fly 624 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL-GIRPFR-LEVQYRMH 686
Fly 687 PELSQFPSNFFYEGSLQNGVCAEDRRLKLDFP----WPQPERPMFFLVTQG-------QEEIAGS 740
Fly 741 GTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIAS 805
Fly 806 VDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLN 870
Fly 871 FYKDRKVLVE-----GSLNNLKESLI--------------HFQKPKKLVNSMNI----------- 905
Fly 906 ------------------GAHFMSTIIADAKEVMVPGSIYDRSGG 932 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
DNA2 | 122..897 | CDD:224037 | 206/694 (30%) | ||
Mis12 | 210..299 | CDD:283509 | 4/9 (44%) | ||
AAA_19 | 458..>515 | CDD:289986 | 33/57 (58%) | ||
AAA_12 | 661..857 | CDD:289832 | 69/208 (33%) | ||
Ighmbp2 | NP_033238.2 | TIGR00376 | 19..640 | CDD:273041 | 201/669 (30%) |
AAA_19 | 197..255 | CDD:289986 | 33/58 (57%) | ||
AAA_12 | 417..613 | CDD:289832 | 69/217 (32%) | ||
SS DNA-binding. /evidence=ECO:0000250 | 637..783 | 17/91 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 650..723 | 15/78 (19%) | |||
R3H_Smubp-2_like | 724..782 | CDD:100070 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 765..815 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 837..872 | ||||
Nuclear localization signal. /evidence=ECO:0000255 | 862..866 | ||||
ZnF_AN1 | 895..935 | CDD:197545 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 953..993 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |