Protein Alignment Upf1 and F53E10.5

DIOPT Version :9

• Sequence 1: NP_001285145.1
• Gene: Upf1 / 32153
• FlyBaseID: FBgn0030354
• Length: 1180
• Species: Drosophila melanogaster
• Sequence 2: NP_503712.2
• Gene: F53E10.5 / 186167
• WormBaseID: WBGene00018761
• Length: 460
• Species: Caenorhabditis elegans
• Alignment Length: 199
• Identity: 43/199 - (21%)
• Similarity: 69/199 - (34%)
• Gaps: 78/199 - (39%)

  Fly   513 EKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYR 577
            ||..|.|    .:..:::|.|:          .::.|.|.:| |.|..||:..   :..|||...
 Worm   302 EKARRIN----EITEENKENIE----------HLQKMSTTAE-KLLNDLKNNK---APNDEKGKM 348

  Fly   578 NLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVG 642
            .:|                   |....|.:|.|          ||.|.:.:...:
 Worm   349 TIK-------------------GTKGSRKTRAK----------QSAESKTLAYKI---------- 374

  Fly   643 DHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVC 707
               :||.|.:.|..|   :|::|.:  :...:..|.||         :..|:|:|||..|.
 Worm   375 ---RLGEVEIEKFQA---ISETLEQ--IAKNVAQFVLE---------NGIPANYFYERPLH---- 418

  Fly   708 AEDR 711
            .|||
 Worm   419 TEDR 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Upf1	NP_001285145.1	UPF1_Zn_bind	98..249	CDD:286500
		DNA2	122..897	CDD:224037	43/199 (22%)
		Mis12	210..299	CDD:283509
		AAA_19	458..>515	CDD:289986	1/1 (100%)
		AAA_12	661..857	CDD:289832	14/51 (27%)
F53E10.5	NP_503712.2	CwlO1	217..374	CDD:226400	24/118 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1112
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900