Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006717743.1 | Gene: | DNA2 / 1763 | HGNCID: | 2939 | Length: | 1090 | Species: | Homo sapiens |
Alignment Length: | 719 | Identity: | 193/719 - (26%) |
---|---|---|---|
Similarity: | 305/719 - (42%) | Gaps: | 186/719 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 285 PLVRLEAEYDQKLKESATQENIEVRWDVGLNKKTIAYF-------TLAKTDSDMKLMHGDELRLH 342
Fly 343 YVGELYNPWSEIGHVIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDF--------IWKCTSFDR 399
Fly 400 ----------------------MTRALCKFAIDRNSVSNFIYSRLLGHGRADSN----------- 431
Fly 432 -------------DEVL-FRGPQ--PKLFSA-PH---------LPDLNRSQVYAVKHA-LQRPLS 469
Fly 470 LIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAID 534
Fly 535 SPVSFLALHNQIRNMETNSELKKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICCTCV 599
Fly 600 GAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQS 664
Fly 665 LFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDR--------------RLKL 715
Fly 716 DF-------PWP----QPERPMFFLVTQ---GQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIK 766
Fly 767 PEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIG 831
Fly 832 -FLNDPRRLNVALTRAKFGIIIVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIH--- 892
Fly 893 -FQK 895 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
DNA2 | 122..897 | CDD:224037 | 193/719 (27%) | ||
Mis12 | 210..299 | CDD:283509 | 4/13 (31%) | ||
AAA_19 | 458..>515 | CDD:289986 | 21/57 (37%) | ||
AAA_12 | 661..857 | CDD:289832 | 78/224 (35%) | ||
DNA2 | XP_006717743.1 | Dna2 | 101..312 | CDD:285859 | |
Cas4_I-A_I-B_I-C_I-D_II-B | <291..427 | CDD:294426 | |||
TIGR00376 | 501..1062 | CDD:273041 | 169/621 (27%) | ||
P-loop_NTPase | 655..905 | CDD:304359 | 80/283 (28%) | ||
AAA_12 | 835..1047 | CDD:289832 | 78/223 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |