| Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001364577.1 | Gene: | R03D7.2 / 174682 | WormBaseID: | WBGene00010989 | Length: | 390 | Species: | Caenorhabditis elegans |
| Alignment Length: | 277 | Identity: | 73/277 - (26%) |
|---|---|---|---|
| Similarity: | 120/277 - (43%) | Gaps: | 53/277 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 610 KFTSILIDESMQSTEPECMVPVVLGA-------KQLILVGDHCQLGPVVMCKKAARAGLSQSLFE 667
Fly 668 RLVVLGIRPFRLEVQY--RMH--PE-LSQFPSNFFYEGSLQN---GVCAEDRRLKLDFP----WP 720
Fly 721 QPER-PMFFL-VTQGQEEIAGSGTSFLNRTE---AANVEKITTRFLKAGIKPEQIGIITPYEGQR 780
Fly 781 AYLVQYMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTR 845
Fly 846 AKFGIIIVGNPKVLAKQ 862 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
| DNA2 | 122..897 | CDD:224037 | 73/277 (26%) | ||
| Mis12 | 210..299 | CDD:283509 | |||
| AAA_19 | 458..>515 | CDD:289986 | |||
| AAA_12 | 661..857 | CDD:289832 | 54/212 (25%) | ||
| R03D7.2 | NP_001364577.1 | DNA2 | <19..302 | CDD:224037 | 71/267 (27%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||