Sequence 1: | NP_001285145.1 | Gene: | Upf1 / 32153 | FlyBaseID: | FBgn0030354 | Length: | 1180 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_491374.2 | Gene: | eri-7 / 172047 | WormBaseID: | WBGene00016566 | Length: | 625 | Species: | Caenorhabditis elegans |
Alignment Length: | 519 | Identity: | 143/519 - (27%) |
---|---|---|---|
Similarity: | 251/519 - (48%) | Gaps: | 81/519 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 449 LPDLNRSQVYAVKHAL--QRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQL 511
Fly 512 TEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSE--LKKLQQLKD-----ETGELS 569
Fly 570 S--ADEKRYRNLKRAAENQLLEAADVI-----CCTCVGAG--DGRLSRVKFTSIL--IDESMQST 623
Fly 624 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL--GIRPFRLEVQYRMH 686
Fly 687 PELSQFPSNFFYEGSLQNGVCAEDRRLKLDFPWPQPER------PMFFLVTQGQEEI-------- 737
Fly 738 -AGSGTSFLNRTEA----ANV--EKIT----TRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQG 791
Fly 792 SLHSRL-YQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGIIIVGN 855
Fly 856 PKVLAK------QQLWNHLLN----FYKDRKVLVEGSL-----NNL---KESLIHFQKPKKLVN 901 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Upf1 | NP_001285145.1 | UPF1_Zn_bind | 98..249 | CDD:286500 | |
DNA2 | 122..897 | CDD:224037 | 142/513 (28%) | ||
Mis12 | 210..299 | CDD:283509 | |||
AAA_19 | 458..>515 | CDD:289986 | 23/58 (40%) | ||
AAA_12 | 661..857 | CDD:289832 | 66/223 (30%) | ||
eri-7 | NP_491374.2 | AAA_11 | 67..273 | CDD:289831 | 63/219 (29%) |
AAA_19 | 77..131 | CDD:289986 | 21/54 (39%) | ||
AAA_12 | 284..502 | CDD:289832 | 63/218 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000219 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.810 |