DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wisp and tut4

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:XP_001335519.6 Gene:tut4 / 323683 ZFINID:ZDB-GENE-030131-2403 Length:1445 Species:Danio rerio


Alignment Length:410 Identity:114/410 - (27%)
Similarity:183/410 - (44%) Gaps:72/410 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   940 ILPPDRYLAQARNIEVTVQPEKLIC-MCKYD----NLSAEIWKR--------------------- 978
            |.|.|.:....|.|....:|..::| :||.|    :...|.:|:                     
Zfish   694 IAPEDLHYIFDRMIFTGGKPPTVVCSICKRDGHLKDKCPEDFKKIELKPLPPMTELFREILDCLC 758

  Fly   979 ---FRGAQQTHNKFKLKMRLWRYLYLWMHQPMFERYRICLVGSTITGFGTDSSDIDMCLLPEQGV 1040
               :|....|..:.:.:.::...|..::.:...::.::||.||:..|||...||:|:|:..|   
Zfish   759 VLCYRELSPTLIEQQKREQILGSLERFIRKEYNDKAQLCLFGSSKNGFGFRDSDLDICMTLE--- 820

  Fly  1041 HPHQHQYHQHHHFHNEKRTEALIILTLFNAVLKDTEVFQDFNLIEARVPILRFKDISNGIEVDLN 1105
                      .|...||.....||..|...:.|.|.:.....:..|:|||::|:...:|:|.|::
Zfish   821 ----------GHDTAEKLNCKEIIEGLAKVLKKHTGLRNILPITTAKVPIVKFEHRQSGLEGDIS 875

  Fly  1106 FNNCVGIKNTYLLQLYAQMDWRTRPLVVIVKLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACV 1170
            ..|.:...||.:|..||.:|.|.:.|...:|::|:..||.||.|.::|||:.:||||::||.. .
Zfish   876 LYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLSSYAYILMVLYFLQQR-Q 939

  Fly  1171 PHVLPCLHSLY-----PEKFQLGQQDCL--DLDLIEPIEPYQALNTQTLGEHLLGFFKYYS-TFD 1227
            |.|:|.|..::     |::...|.....  |||.:....|....|.:|:||..||..::|: .||
Zfish   940 PPVIPVLQEIFDGNTTPQRMVDGWNAFFFDDLDELRRRLPELHQNRETVGELWLGLLRFYTEEFD 1004

  Fly  1228 FRNFAISIRTGGVLPVSTCRMAKSPKNDVYQW--KELNIEEPFDLS-NTARSVYDGPTFERVKAV 1289
            |:...||||       ...|:....|    ||  |.:.||:||||: |....|....|...:|| 
Zfish  1005 FKEHVISIR-------QRKRLTTFEK----QWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKA- 1057

  Fly  1290 FLISARRLDHTLDLATIFRP 1309
             .|:.|:|     ..|.|.|
Zfish  1058 -FINGRKL-----FGTPFYP 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 33/134 (25%)
PAP_assoc 1211..1272 CDD:281779 24/64 (38%)
tut4XP_001335519.6 MIP-T3 5..>116 CDD:313469
PAP_assoc 201..>443 CDD:332051
NT_PAP_TUTase 255..367 CDD:143392
PAP_assoc 499..548 CDD:309089
PAP_assoc 728..>1064 CDD:332051 100/362 (28%)
AIR1 <1091..>1154 CDD:331526
PAT1 1165..>1297 CDD:330585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.