DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wisp and Mtpap

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:XP_038951672.1 Gene:Mtpap / 307050 RGDID:1310900 Length:584 Species:Rattus norvegicus


Alignment Length:560 Identity:125/560 - (22%)
Similarity:214/560 - (38%) Gaps:134/560 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 PALSSSSLGSESQWSGTSNRSRLGHNGHPSISPTPSALGSAQLSPHLAEMRVQHPLHQQ-----H 886
            |....:|:|||.|.||.:.                :......|....:|::.:.....|     |
  Rat    33 PGTRVASVGSEEQPSGGAE----------------TGTEDKTLQKKFSEVQKERREQAQRTVLIH 81

  Fly   887 PPSHASHR-------PHGQMGGH----AMSSYV----------------PHRPPPPPHPSI---- 920
            .|::.:.:       .||.:..|    :...|.                .|.|......:|    
  Rat    82 CPNNINEKKFLKYLSQHGSISNHFFYESFGLYAVVEFCQKDSINSLQNGTHTPTQSTEAAIPFKS 146

  Fly   921 -----SSPNPTPVATGAGGPWYEMILPPDRYLAQARNIEVTVQPEKLICMCKY-DNLSAEIWKRF 979
                 ...||:...:|......:...||              ..:||..:..| :::.|::....
  Rat   147 RFLNLKLKNPSNQVSGQSFVQADSQSPP--------------SSKKLFELLSYAESIDAQLTALL 197

  Fly   980 RGAQQTHNKFKLKMRLWRYLYLWMHQPMFERY-RICLV---GSTITGFGTDSSDIDMCL-LPEQG 1039
            :..|.|....:|     |:|...:.:.:...| ..|:|   ||::..||....|:||.| |.|.|
  Rat   198 KAFQLTEENVRL-----RHLTCSLIEDIAAAYFPSCVVWPFGSSVNTFGKLGCDLDMFLDLDETG 257

  Fly  1040 ---VHPHQHQYHQHHHFHN--EKRTEALIILTLFNAVLKDTEVFQDF--------NLIEARVPIL 1091
               .|.:...:.......|  .:|.....||::..      |...:|        .::.||.|::
  Rat   258 NLSDHKNTGNFLMEFQVKNVPSERVATQKILSVIG------ECLDNFGPGCVGVQKILNARCPLV 316

  Fly  1092 RFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVIVKLWAQYHDINDA-KRMTISSY 1155
            ||....:|.:.||..||.:.:|::.||.:|..:|.|.|.||..|:.||:.|.:..: ....|:::
  Rat   317 RFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFGVRCWARAHSLTSSIPGAWITNF 381

  Fly  1156 SLVLMVLHYLQHACVPHVLPCLHSL-----YPEKFQLGQQDCLDLDLIEPIEPYQALNTQTLGEH 1215
            ||.:||:.:||... |.:||.|.||     ..::..|...:|..:..|..|:|  :.||:||...
  Rat   382 SLTMMVIFFLQRRS-PPILPTLDSLKSMADAEDRCILEGNNCTFIQDINKIKP--SGNTETLELL 443

  Fly  1216 LLGFFKYYSTFDFRNFAISIRTGGVLPVSTCRMAKSPKNDVYQWKELNIEEPFDLS-NTARSVYD 1279
            |..||:|:..|.|...:|:||.|        |....|.:     ..|.|:.||:.| |.:::|..
  Rat   444 LKEFFEYFGNFAFNKNSINIRQG--------REQNKPDS-----SPLYIQNPFETSLNISKNVSQ 495

  Fly  1280 GPTFERVK----AVFLISARRLD------HTLDLATIFRP 1309
            ....:.|:    :.:::...:.|      |...||.:..|
  Rat   496 NQLQKFVELARDSAWILEQEKKDQPSSSSHPWGLAALLLP 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 37/152 (24%)
PAP_assoc 1211..1272 CDD:281779 19/61 (31%)
MtpapXP_038951672.1 RL 63..132 CDD:407669 8/68 (12%)
TRF4 184..>496 CDD:227585 92/338 (27%)
NT_PAP_TUTase 209..347 CDD:143392 37/148 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.