DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wisp and Tent4a

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:XP_006517250.1 Gene:Tent4a / 210106 MGIID:2682295 Length:732 Species:Mus musculus


Alignment Length:650 Identity:139/650 - (21%)
Similarity:220/650 - (33%) Gaps:204/650 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   682 GGHGLLSPVTTTTPTKMISCAQLDEAITAAAASGDKLSTSPSYNQAGHYIMPPQQQQQQQLSSHP 746
            ||.|..|.....:|           |:..|||.|.....:|:                   :..|
Mouse    33 GGSGFASYFCLNSP-----------ALDTAAAPGAAGRAAPA-------------------AGGP 67

  Fly   747 IPTGTSSHPPPPP-----PPHMFFHFADGFCNPGQGHQAPPATMWPHSSSPCYPASYGSSCGSGT 806
            .|...:|.|||.|     ||.:.........:..:.|::|..:    |||        ||..|..
Mouse    68 GPAPAASSPPPAPGPAALPPALLTALGPAADSARRLHKSPSLS----SSS--------SSSSSNA 120

  Fly   807 GAGTSPHNNDGNAGALRPASPALSSSSLGSESQWSGTSNRSRLGH-----NGHPS-ISPTPSALG 865
            .:||.              ||..||||..|.|.....|.|:....     :.||. ...||:.  
Mouse   121 ESGTE--------------SPGCSSSSSSSTSLGRAGSGRTFFSFADGAAHAHPGPRGSTPAG-- 169

  Fly   866 SAQLSPHLAEMRVQHPLHQQHPPSHASHRPHGQMGGHAMSSYVPHRPPPPPHPSISSPNPTPVAT 930
                ||         |.||.||............|    .:|            :.|.:.....:
Mouse   170 ----SP---------PQHQFHPGRRKRENKASTYG----LNY------------LLSGSRAATLS 205

  Fly   931 GAGGPWYEMILPPDRYLAQARNIEVTVQPEKLICMCKYDN-------LSAEIWKRFRGAQQTHNK 988
            |.|||..:...|...:.::|.:..:....|::|....:.:       :..|:.||.....:.   
Mouse   206 GGGGPGAQAARPGTPWKSRAYSPGIQGLHEEIIDFYNFMSPCPEEAAMRREVVKRIETVVKD--- 267

  Fly   989 FKLKMRLWRYLYLWMHQPMFERYRICLVGSTITGFGTDSSDIDMCLLPEQGVHPHQHQYHQHHHF 1053
                        ||   |..:   :.:.||..||....:||||:.:..:....|           
Mouse   268 ------------LW---PTAD---VQIFGSFSTGLYLPTSDIDLVVFGKWERPP----------- 303

  Fly  1054 HNEKRTEALIILTLFNAVLKDTEVFQDFN---LIEARVPILRFKDISNGIEVDLNFNNCVGIKNT 1115
                       |.|....|:...|.:..:   |.:|.|||::..|....::||::||...|::..
Mouse   304 -----------LQLLEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAA 357

  Fly  1116 YLLQLYAQMDWRTRPLVVIVKLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSL 1180
            ..::.|.:.......|::::|.:....|:|:.....||||||:||.:.:||             |
Mouse   358 EFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQ-------------L 409

  Fly  1181 YPEKFQLGQQDCLDLDLIEPIEPYQALNTQTLGEHLLGFFKYYS-TFDFRNFAISIRTGGVLPVS 1244
            :|.                 |:..:|  .:.||..|:.||:.|. .|::....|.|:.||     
Mouse   410 HPR-----------------IDARRA--DENLGMLLVEFFELYGRNFNYLKTGIRIKEGG----- 450

  Fly  1245 TCRMAKSPKNDV-------YQWKELNIEEPFDLSN-TARSVYDGPTFERVKAVFLISARRLDHTL 1301
                |...|.::       |:...|.||:|....| ..||.|..   .:||.||..:...|.|.:
Mouse   451 ----AYIAKEEIMKAMTSGYRPSMLCIEDPLLPGNDVGRSSYGA---MQVKQVFDYAYIVLSHAV 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 27/137 (20%)
PAP_assoc 1211..1272 CDD:281779 18/68 (26%)
Tent4aXP_006517250.1 TRF4 233..>538 CDD:227585 79/362 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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