DRSC/TRiP Functional Genomics Resources

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Protein Alignment wisp and cid-1

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:NP_498099.1 Gene:cid-1 / 175707 WormBaseID:WBGene00019629 Length:1425 Species:Caenorhabditis elegans


Alignment Length:425 Identity:118/425 - (27%)
Similarity:186/425 - (43%) Gaps:112/425 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   939 MILPP-DRYLAQARNIEVTVQPEKLICMCKYDNLSAEIWKRFRGAQQTHNKFKLKMRLWRYLYLW 1002
            |.:|| .:|  |||..|.....:.:|....::|:..|  :|.:......::.:..:|        
 Worm   990 MEIPPIKKY--QARTPEDLKDIDDMIDKYYHENILDE--RRLKMLDHKIDELQSFLR-------- 1042

  Fly  1003 MHQPMFERYR----ICLVGSTITGFGTDSSDIDMCLLPEQGVHPHQHQYHQHHHFHNEKRTEALI 1063
                  :.||    :...||.:||...:.||||:||....|..|.:.                  
 Worm  1043 ------KNYREDVTLTTFGSVMTGLSVNCSDIDICLRFGDGDVPPKD------------------ 1083

  Fly  1064 ILTLFNAVLKDTEVFQDFNLIE-------ARVPILRFK-DISNG--IEVDLNFNNCVGIKNTYLL 1118
             ||....:.|...|.:..:|::       |:|||::|: .:|||  |:||:::.|.:.|.||.||
 Worm  1084 -LTAKEVIQKTESVLRKCHLVKRVQAIVTAKVPIVKFQVKLSNGAIIDVDISYYNILAIYNTALL 1147

  Fly  1119 QLYA--QMDWRTRPLVVIVKLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLY 1181
            :.|:  ..|.|...|.:.||.||:..:|.||.|.::|||..|:|::.|||: |.|.|||.|.   
 Worm  1148 KEYSLWTPDKRFAKLALFVKTWAKNCEIGDASRGSLSSYCHVIMLISYLQN-CDPPVLPRLQ--- 1208

  Fly  1182 PEKFQLGQQDCLDLDLIEPIEPYQA-----------LNTQTLGEHLLGFFKYYSTFDFRNFAISI 1235
             |.|   :.|..:..|::..:...|           .|.::..:.|:|:|.|||.||||||.:..
 Worm  1209 -EDF---RSDNRERRLVDNWDTSFAQVETSLLQRWPKNKESCAQLLIGYFDYYSRFDFRNFVVQC 1269

  Fly  1236 RTGGVLPVSTCRMAKSPKNDVYQW-KELNIEEPFDLSNTARSVYDGPTFERVKAVFLISARRL-- 1297
            |...:|    .:|.|       :| :.|.:|:|||||:...|..:...|..:..|| |::|.:  
 Worm  1270 RREMIL----SKMEK-------EWPRPLCVEDPFDLSHNLSSGVNKKMFVFIMKVF-INSRAVFM 1322

  Fly  1298 --------DHTLDLATIFRPIHHVPEHFPQLQQHQ 1324
                    |||                |....|||
 Worm  1323 SEKPPMNRDHT----------------FLSSYQHQ 1341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 37/148 (25%)
PAP_assoc 1211..1272 CDD:281779 23/61 (38%)
cid-1NP_498099.1 PAP_assoc 574..625 CDD:367682
NT_PAP_TUTase 1029..1151 CDD:143392 37/154 (24%)
TRF4 1034..>1317 CDD:227585 98/335 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R202
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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