DRSC/TRiP Functional Genomics Resources

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Protein Alignment wisp and gldr-2

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:NP_001021434.1 Gene:gldr-2 / 173373 WormBaseID:WBGene00009284 Length:808 Species:Caenorhabditis elegans


Alignment Length:388 Identity:127/388 - (32%)
Similarity:189/388 - (48%) Gaps:53/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   943 PDRYLAQARNIEVTVQPEKLICMCKYDN------------LSAEIWKRFRGAQQTHNKFKLKMRL 995
            |..|  |||.|.|.:.......:.|:.|            ||...|..:.|..|....|..||..
 Worm   425 PVNY--QARTIGVVLNERIAGSVEKFVNSITKKSFNSVKQLSKLAWDHYLGNAQPDFVFLKKMEA 487

  Fly   996 WRYLYLWMHQPMFERYRICL--VGSTITGFGTDSSDIDMCL-LPEQGVHPHQHQYHQHHHFHNEK 1057
            .:.|:..: :.:|....|.|  .|||:.|.|:.:||:|:|| .|..|     ::......||.::
 Worm   488 RQKLFSEI-KKLFPDTEIKLQTTGSTVNGCGSFNSDMDLCLCFPTNG-----YKGQVCDDFHCDR 546

  Fly  1058 RTEALIILTLFNAVLKD------TEVFQDFNLIEARVPILRFKDISN----GIEVDLNFNNCVGI 1112
            .....|:..:..|..:.      .::.:...|:.|:|||:  |.|.|    |||||:|.||..||
 Worm   547 NYSTKILRKIDKAFRRSHWSHPLKKIIKTMQLVPAKVPIV--KMILNGEFDGIEVDINVNNIAGI 609

  Fly  1113 KNTYLLQLYAQMDWRTRPLVVIVKLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCL 1177
            .|::|:..|:..|.|...|.::||.||....||:|:...::||:.:|:|:||||....|.|:|.|
 Worm   610 YNSHLIHYYSLTDARLPALALLVKHWAMVTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNL 674

  Fly  1178 HSLYPEKF--QLGQQDCLDLDLIEPIEPYQALNTQTLGEHLLGFFKYYSTFDFRNFAISIRTGGV 1240
            ..|:|.||  :|...:.|....|....|....||.:|||.|:|||:||:.|||.||..|||:|.|
 Worm   675 QYLFPHKFDRKLPLNELLLFGDIADKLPTSPPNTWSLGELLIGFFQYYNEFDFTNFGFSIRSGQV 739

  Fly  1241 LPVSTC--RMAKSPKNDVYQWKELNIEEPFDLSNTARSVYDGPTFERVKAVF-----LISARR 1296
            :|....  .:..||         :.:|||||..||||:|.|....:.:|:.|     :||:.:
 Worm   740 IPRENLPRDLINSP---------IVVEEPFDAINTARTVRDVSHMKSIKSAFRCAVQIISSNK 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 43/147 (29%)
PAP_assoc 1211..1272 CDD:281779 27/62 (44%)
gldr-2NP_001021434.1 TRF4 483..>799 CDD:227585 112/328 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I7926
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4663
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001361
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12271
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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