DRSC/TRiP Functional Genomics Resources

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Protein Alignment wisp and gld-4

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:NP_492446.3 Gene:gld-4 / 172735 WormBaseID:WBGene00014115 Length:845 Species:Caenorhabditis elegans


Alignment Length:432 Identity:88/432 - (20%)
Similarity:156/432 - (36%) Gaps:128/432 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   918 PSISSPNPT-PVATGAGGPWYEMILPPDRYLAQARNIEVTVQPEKLICMCK--------YDNLSA 973
            ||.|:|..: |....:..|      ...|.|:|::....|.:      .||        .|:|..
 Worm    13 PSTSTPRSSIPSTMNSDEP------NTCRRLSQSQEQPSTSR------TCKSETPEFGYSDSLPF 65

  Fly   974 EIWKRFR---GAQQTHNKF----------KLKMRLWRYLYLWMHQPMFERY-----RICLVGSTI 1020
            ..|:|.|   ..|..|.:.          :::.||...::..:...:..|:     :|.:.||..
 Worm    66 APWRRKRYGLNIQGLHEEIVDMYHWIKPNEIESRLRTKVFEKVRDSVLRRWKQKTIKISMFGSLR 130

  Fly  1021 TGFGTDSSDIDMCLLPEQGV-HPHQHQYHQHHHFHNEKRTEALIILTLFNAVLKDTEVFQDFNLI 1084
            |.....:||||:.:..:..| .|.............:...|::::..                  
 Worm   131 TNLFLPTSDIDVLVECDDWVGTPGDWLAETARGLEADNIAESVMVYG------------------ 177

  Fly  1085 EARVPILRFKDISNGIEVDLNFNNCVGIK-NTYLLQLYAQMDWRTRPLVVIVKLWAQYHDINDAK 1148
            .|.|||::..|....:.:|::||...|:: .:|:.::..:.. ...|||:::|.:..|.::|...
 Worm   178 GAFVPIVKMVDRDTRLSIDISFNTVQGVRAASYIAKVKEEFP-LIEPLVLLLKQFLHYRNLNQTF 241

  Fly  1149 RMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYPEKFQLGQQDCLDLDLIEPIEPYQALNTQT-- 1211
            ...:|||.|||:::::.|             ||                        |||.::  
 Worm   242 TGGLSSYGLVLLLVNFFQ-------------LY------------------------ALNMRSRT 269

  Fly  1212 -------LGEHLLGFFKYYS-TFDFRNFAISIRTGGVLPVSTCRMAKSPKNDVYQWKE-----LN 1263
                   ||..||.|.:.|| .|:|....||       |...|.:.||.....|..|:     |.
 Worm   270 IYDRGVNLGHLLLRFLELYSLEFNFEEMGIS-------PGQCCYIPKSASGARYGHKQAQPGNLA 327

  Fly  1264 IEEPFDLSN-TARSVYD--------GPTFERVKAVFLISARR 1296
            :|:|...:| ..||.|:        |..|:.:.....:..|:
 Worm   328 LEDPLLTANDVGRSTYNFSSIANAFGQAFQILLVAVTLRERK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 24/151 (16%)
PAP_assoc 1211..1272 CDD:281779 20/75 (27%)
gld-4NP_492446.3 NT_PAP_TUTase 100..213 CDD:143392 23/130 (18%)
PAP_assoc 276..336 CDD:281779 20/66 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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