DRSC/TRiP Functional Genomics Resources

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Protein Alignment wisp and pup-3

DIOPT Version :9

Sequence 1:NP_001285144.1 Gene:wisp / 32152 FlyBaseID:FBgn0260780 Length:1373 Species:Drosophila melanogaster
Sequence 2:NP_491621.1 Gene:pup-3 / 172207 WormBaseID:WBGene00019082 Length:482 Species:Caenorhabditis elegans


Alignment Length:453 Identity:105/453 - (23%)
Similarity:177/453 - (39%) Gaps:104/453 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   887 PPSHAS--HRPHGQMGGHAMSSYVPHRPPPPPHPSISSPNPTPVATGAG-----GPWYEMILPPD 944
            |.::||  ..|.|..   .::.|.|..|..|...:||:.:...:...||     |..:|     :
 Worm     3 PRTYASVLTTPRGPA---PLALYCPEAPECPKLEAISNLSFQQITQQAGTSNDQGFEFE-----N 59

  Fly   945 RYLAQARNIEVTVQPEKLICMCKYDNLSAEIWKRFRGAQQTHNKFKLKMRLWRYLYLWMHQPMFE 1009
            .|:....|.|:    |..:                    .||::..|:....::     ...|.:
 Worm    60 TYVEHRINQEI----ESFV--------------------DTHHQEPLRKAAAQF-----RAVMKQ 95

  Fly  1010 RY--RICLV-GSTITGFGTDSSDIDMCL-LPE-QGVHPHQHQYHQHHHFHNEKRTEALIILTLFN 1069
            .|  ..|.: ||...|....|||||..: :|. :|.:|.....        :.|.|.....|:|:
 Worm    96 EYPDSTCFITGSYPAGVDIFSSDIDFTVKVPTLEGANPFLKLM--------QLRKELSCYYTIFS 152

  Fly  1070 AVLKDTEVFQDFNLIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVI 1134
            ...          :.:..:|:|:.......:.:|:..:|....:||.||..|:|:|.|...|...
 Worm   153 KAY----------VQKGNIPVLQLMHAETKVSIDVTIDNDTSKRNTQLLAFYSQLDTRFPLLCKA 207

  Fly  1135 VKLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYPE---------------- 1183
            :|.||....:..|.|..::|:||.||::||||   ...||..:..::||                
 Worm   208 MKAWAASCGVEGASRGRLNSFSLCLMLIHYLQ---TVQVLLNIQEIFPELNGDIVVEDDNYMKRD 269

  Fly  1184 -KFQLGQQDCLDLDLIEPIEPYQALNTQTLGEHLLGFFKYYSTFDFRNFAISIRTGGVLPVSTCR 1247
             |.::.::...|.:          .||.:|....:||.||||.|:|:...|||:.|.||.....:
 Worm   270 LKIEILEKGAFDFN----------QNTSSLAVLFIGFMKYYSEFNFKWNWISIKHGNVLKKKWSK 324

  Fly  1248 MAKSPKNDV-YQWKELNIEEP-FDL-SNTARSVYDGPTFERVKAVFLISARRLDHTLDLATIF 1307
             .:.|||.: ...:.:.:.:| .:: .|.|.:|......||::..|.....|:   |...|||
 Worm   325 -TRVPKNGMPKDCRFIVVADPLLEIPRNCAGTVRQQNYMERIQLEFREEYERI---LKRKTIF 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wispNP_001285144.1 NT_PAP_TUTase 987..1122 CDD:143392 27/139 (19%)
PAP_assoc 1211..1272 CDD:281779 19/63 (30%)
pup-3NP_491621.1 TRF4 90..>374 CDD:227585 78/315 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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