DRSC/TRiP Functional Genomics Resources

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Protein Alignment sicily and Ndufaf6

DIOPT Version :9

Sequence 1:NP_001285142.1 Gene:sicily / 32151 FlyBaseID:FBgn0030352 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_001078962.1 Gene:Ndufaf6 / 76947 MGIID:1924197 Length:333 Species:Mus musculus


Alignment Length:302 Identity:127/302 - (42%)
Similarity:179/302 - (59%) Gaps:20/302 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KKVIEADKNGYGAKH--CMSLVEKYDYENYLCTLLLPRELRRAAFALRAFNVEVSR---SVSGHQ 100
            :.|..|...|....|  |:.|:.|.|||:|||:||.|.|.:|:|.||||||||:::   |||   
Mouse    44 RSVAAASGPGIPGSHLYCLELLRKRDYESYLCSLLFPAECQRSASALRAFNVELAQVKDSVS--- 105

  Fly   101 IEPQIAKMRLKFWHDSIDK--CFEPDSQRSYVEDQPVLRELKHTVGSRKLNKVYLRRLVTARERP 163
             |..|..||::||..:::.  |..|       ..|||..||...|....|.|.:|.|::..||:.
Mouse   106 -EKTIGLMRMQFWKKAVEDMYCDNP-------PHQPVAIELWKAVKKHNLTKRWLMRIIDEREKN 162

  Fly   164 -PTHAFESIRELEEYTEQTFSSLLLLLLEVGGVRDLNADHAASHLGKAQGIATLLRSIPLAGRQQ 227
             ...|:.|::|||.|.|.|..|||.|.|||.||:||:|||||||:||||||.|.||:.|....::
Mouse   163 LDDKAYRSMQELENYAENTQGSLLYLTLEVLGVKDLHADHAASHIGKAQGIVTCLRATPYHSSRR 227

  Fly   228 APCIPLEVLVLHGVSQERIIRSKSDDKGVEDCIFDVASAANTHLKLARQLHDKVPPQVRKIFLSA 292
            ...:|::|.|.||||||..:| ::.||.|.|.::|:||.|:.|||.||..|..||.:....||..
Mouse   228 QVFLPMDVCVQHGVSQEDFLR-RNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEAFPAFLQT 291

  Fly   293 VATDAYLERLRRANFLLTHKSCVGRDTLLPARLFWKSLLNRF 334
            |:.:.||::::|.:|.:.|.|...::.|||..|:.:|...|:
Mouse   292 VSLEDYLKKIQRVDFDIFHPSLQQKNMLLPLSLYIQSWRKRY 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sicilyNP_001285142.1 SQS_PSY 60..312 CDD:278896 113/257 (44%)
Ndufaf6NP_001078962.1 SQS_PSY 65..311 CDD:278896 113/257 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849343
Domainoid 1 1.000 193 1.000 Domainoid score I3205
eggNOG 1 0.900 - - E1_COG1562
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43831
Inparanoid 1 1.050 211 1.000 Inparanoid score I3643
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63146
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006635
OrthoInspector 1 1.000 - - oto93191
orthoMCL 1 0.900 - - OOG6_103504
Panther 1 1.100 - - LDO PTHR21181
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3658
SonicParanoid 1 1.000 - - X5635
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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