DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1840 and selenok

DIOPT Version :9

Sequence 1:NP_572764.1 Gene:CG1840 / 32150 FlyBaseID:FBgn0030351 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_001004681.2 Gene:selenok / 791738 ZFINID:ZDB-GENE-040912-131 Length:94 Species:Danio rerio


Alignment Length:102 Identity:34/102 - (33%)
Similarity:42/102 - (41%) Gaps:22/102 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAYVDQNGRLWEKR---PWDLRRVLDTFVGIWFAVKQLLASFLSPFTGNDSNGDNSRRGNGWGSS 62
            |.|| .||::.:.|   ||.|..:.|.|   |.||:     |:..|.......|.|:.||...||
Zfish     1 MVYV-SNGQVLDSRSRSPWSLSFLTDFF---WGAVE-----FIGLFFQTLVQPDLSKDGNNSASS 56

  Fly    63 SWGGGGGGGGGGG----GGGGGGGG------GGGGSG 89
            .:..|.|..|..|    |....|.|      |||| |
Zfish    57 RFSDGRGPPGFPGRRRMGRINHGAGPTPPPMGGGGUG 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1840NP_572764.1 DUF2763 2..>65 CDD:287875 21/65 (32%)
selenokNP_001004681.2 DUF2763 2..75 CDD:287875 25/81 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..94 18/49 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR16875
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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