DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB5 and cad

DIOPT Version :10

Sequence 1:NP_002138.1 Gene:HOXB5 / 3215 HGNCID:5116 Length:269 Species:Homo sapiens
Sequence 2:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster


Alignment Length:254 Identity:79/254 - (31%)
Similarity:107/254 - (42%) Gaps:50/254 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    26 SGSSLSGSYRDPAAMHTGSYGY-NYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQAA 89
            ||||.||          |:.|. ..|..:.|:....|...  |.||.::...|..| .|..:|..
  Fly   123 SGSSSSG----------GAPGAPQLNETNSSIGVGGAGGG--GGVGGATDGGPGSA-PPNHQQHI 174

Human    90 SSCSLSSPESLPCTNGDSHGAKPSASSPSDQAT---SASSSANFTEIDEASASSEPEEAASQLSS 151
            :....|.|.::..:...|.||..|||||.....   ||.::.|....:..::.|......:..|.
  Fly   175 AEGLPSPPITVSGSEISSPGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSV 239

Human   152 PSLARAQPEPMATSTAAPEGQTPQIFPWMRK----------------LHISHDMTGPDGK----- 195
            .:..|..|            ..|..|.||:|                |....|:....||     
  Fly   240 SNNNRTSP------------SKPPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKD 292

Human   196 RARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 254
            :.|..||.:|.||||||:..:||:|.||:.|:|..|.|||||:||||||||.|.:|.||
  Fly   293 KYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB5NP_002138.1 PRK07003 <67..>171 CDD:235906 24/106 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..173 21/98 (21%)
Antp-type hexapeptide 176..181 2/4 (50%)
Homeodomain 195..251 CDD:459649 33/60 (55%)
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 32/54 (59%)

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