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Protein Alignment CG10352 and hdhd2

DIOPT Version :9

Sequence 1:	NP_001259468.1	Gene:	CG10352 / 32147	FlyBaseID:	FBgn0030348	Length:	315	Species:	Drosophila melanogaster
Sequence 2:	NP_001013491.1	Gene:	hdhd2 / 541346	ZFINID:	ZDB-GENE-050320-37	Length:	262	Species:	Danio rerio

Alignment Length:	278	Identity:	71/278 - (25%)
Similarity:	109/278 - (39%)	Gaps:	67/278 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    41 IPGSAEALAHLAHLGKDVTFVTNNSISSVKEHIEKFEKQGHLKIDEHQIVHPAQTICDHLRSIKF 105
            :||:.||||.|......|.||||    :.||                    ..:|:.:.||.:.|
Zfish    25 VPGAQEALARLRQAPVAVKFVTN----TTKE--------------------CKRTLFERLRGLNF 65

  Fly   106 EGLIYCLATSPFKEILVNAGFRLAQENGSGIITRLKDLHEAIFSG-ESVD--AVIIDVDFNLSAA 167
            :.....:.||      :.|...|.::.....:..::|.....|:| |:.|  ||:|.
Zfish    66 DLQQQEIFTS------LTAARNLVEQKAVRPLLMVEDSALEDFTGLETSDPNAVVIG-------- 116

  Fly   168 KLMRAHFQLQNPKCLF---LAGAADALIPFGK--------GEIIGPGAFIDVVTQAVGRQPITLG 221
             |...||..|.....|   |.||  .||...|        |..:|||.|:..:..|...:...:|
Zfish   117 -LAPDHFNYQTLNKAFQLILDGA--PLIAIHKARYYKKKDGLALGPGPFVTGLEYATDTKATVVG 178

  Fly   222 KPGEDLRKLLLERHREI--PPSRVLFVGDSLASDIGFARASGYQTLLVLTGGTKLEDVQRL-PID 283
            ||.   :...||..|::  .|...:.:||....|:|.|:.:|...:||.||..:..|..:: |..
Zfish   179 KPE---KGFFLEALRDLNCSPEEAVMIGDDARDDVGGAQNAGMLGILVKTGKYRPADEGKINPPP 240

  Fly   284 H---SQMPD---YLADCL 295
            |   :..|:   |:.|.|
Zfish   241 HLTCASFPEAVNYILDHL 258

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.