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Protein Alignment CG15739 and Hdhd2

DIOPT Version :9

Sequence 1:	NP_001259467.1	Gene:	CG15739 / 32146	FlyBaseID:	FBgn0030347	Length:	308	Species:	Drosophila melanogaster
Sequence 2:	NP_001034290.1	Gene:	Hdhd2 / 76987	MGIID:	1924237	Length:	259	Species:	Mus musculus

Alignment Length:	254	Identity:	49/254 - (19%)
Similarity:	102/254 - (40%)	Gaps:	46/254 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 VVSDIDGVLWTFEQSIPRAADGYAALEQMGKHLTFLTNNSVRTSEQCVKLFAKIGMQVHPEQIWH 89
            |:.|::|.|...:.::|.|.:....|......:.|:||.:..:.:..::...|:..::..::|:.
Mouse    10 VLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERLKKLEFEISEDEIFT 74

  Fly    90 PAKSIVSYLQSIKFEGLIYIIASQSFKTVLREAGFQLLDGPNEFIEESYASLAEHIFGKEPVRAV 154
            ...:..:.::..:...::.:    ..:.:....|.|..| ||                     ||
Mouse    75 SLTAARNLIEQKQVRPMLLV----DDRALPEFTGVQTQD-PN---------------------AV 113

  Fly   155 IIDVDFNLTSPKILRAHLYLRHPECMLIEGATDRLLPV-------AKEVNIVGPGAFASILVEAS 212
            :|.:     :|:.....| |.....:|::||.  |:.:       .|:...:|||.|.:.|..|:
Mouse   114 VIGL-----APEHFHYQL-LNQAFRLLLDGAP--LIAIHKARYYKRKDGLALGPGPFVTALEYAT 170

  Fly   213 GKQPITLGKPGRELGDLLVEHYQIVQ--PSRVLMIGDMLAQDVSFGRQCGFQTLLVLSG 269
            ..:.:.:|||.:   ...:|..:...  |...:||||....||...:..|...:||.:|
Mouse   171 DTKAMVVGKPEK---TFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTG 226

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.