DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1847 and shu

DIOPT Version :9

Sequence 1:NP_001368980.1 Gene:CG1847 / 32144 FlyBaseID:FBgn0030345 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_611837.1 Gene:shu / 45360 FlyBaseID:FBgn0003401 Length:455 Species:Drosophila melanogaster


Alignment Length:332 Identity:69/332 - (20%)
Similarity:119/332 - (35%) Gaps:83/332 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IRKEILNPGNAYIELTPG-TRVKFHFQTRRAGDSRIIDDSRKMEKPMELVLGKKFKLEV------ 69
            |.|.|...|:...|..|. .||...:.....|::...|.|        |:.|.||..|.      
  Fly    85 IYKRITRTGHVDREAVPNKARVSVRYSGYWEGETAPFDSS--------LLRGSKFVFETGQGTVV 141

  Fly    70 --WELIVQQMSLNEVAKFTVHKSLCAQYPFISKTLRDIGKKPEERRHCCGMTLQNEGIGYT---- 128
              .|:.|:.|...|.|:|.:...|         ...::|..|..:.....: .:.|.|.|:    
  Fly   142 EGLEVAVRSMRPYEQAEFIISYKL---------LFGELGCPPRIKPKADAL-FKVEVIDYSLIGD 196

  Fly   129 --DLDELLQNPSDLEFIIELFSIELPEQYEKERWQMSDDEKMLATSTLRERGNNFYKASRFTEAE 191
              .:|.:.|...|      .|.:..|:..:                 |...|.:..|..|:..|.
  Fly   197 AKGIDAIPQEDRD------KFCVVYPKAVD-----------------LHLHGKDSVKLGRYQSAA 238

  Fly   192 TCYREAVGIVEQL-MLKEKPHDEEWQELAAIKTPLLLNYAQ-------CRLIAGDFYAVIEHCNE 248
            |.:..||..:... |..::...::.:.|..:...|::.|.:       |.::     ..:.|   
  Fly   239 TAFERAVSSLNYCRMANDEEERKQTELLTTLNQNLMIVYNKMNKPKRACIMM-----KALRH--- 295

  Fly   249 VLTLDPRNVKALFR--RAKAHAGAWNPAQARRDFLDALALDASLKSTVSKELKSIED-----QQQ 306
             ||:...:.||||:  ||.|..|.:|  .||..:|.|.|...:.|. :|.|:.|:..     ::.
  Fly   296 -LTMGNPSCKALFQEGRALAALGEYN--LARNAYLQAQAKQPANKE-ISDEIISMNKRISKYEEA 356

  Fly   307 ARNVQDR 313
            :|::..|
  Fly   357 SRDIWAR 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1847NP_001368980.1 FKBP_C 23..>92 CDD:395196 18/77 (23%)
3a0801s09 150..>308 CDD:273380 35/172 (20%)
TPR repeat 173..217 CDD:276809 9/44 (20%)
TPR repeat 222..252 CDD:276809 5/36 (14%)
TPR repeat 257..285 CDD:276809 13/29 (45%)
shuNP_611837.1 FKBP_C 96..189 CDD:278674 22/110 (20%)
TPR repeat 218..257 CDD:276809 9/55 (16%)
TPR repeat 262..295 CDD:276809 4/37 (11%)
TPR repeat 304..329 CDD:276809 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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