DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrd1 and SPP

DIOPT Version :10

Sequence 1:NP_572757.2 Gene:Nrd1 / 32143 FlyBaseID:FBgn0030344 Length:1147 Species:Drosophila melanogaster
Sequence 2:NP_199054.1 Gene:SPP / 834245 AraportID:AT5G42390 Length:1265 Species:Arabidopsis thaliana


Alignment Length:877 Identity:178/877 - (20%)
Similarity:304/877 - (34%) Gaps:262/877 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 IDYGSFAEPTKYQGLAHFLEHMIFMGSEKYPKENIFDAHIKKCGGFANANTDCEDTLFYFEVAEK 206
            :..||..|....||:||.:||:.|:||:|..|       :...|..:||.||...|:|:......
plant   224 VHVGSIDEEEDEQGIAHMIEHVAFLGSKKREK-------LLGTGARSNAYTDFHHTVFHIHSPTH 281

  Fly   207 HLDSSLDYFTALMKA-------PLMKQEAMQRERSAVDSEFQQILQDDETRRD-QLLASLATKG- 262
            ..||..|.|.:::.|       |......:::||.|:.||. |::...|.|.| |||..|.::. 
plant   282 TKDSEDDLFPSVLDALNEIAFHPKFLSSRVEKERRAILSEL-QMMNTIEYRVDCQLLQHLHSENK 345

  Fly   263 ----FPHGTFAWGNMKSLKENVDDAELHKILHEIRKEHYGANRMYVCLQARL----PIDELESLV 319
                ||.|         |:|.:...::.|    |||.|   .|.|....|.|    .||.:..:|
plant   346 LGRRFPIG---------LEEQIKKWDVDK----IRKFH---ERWYFPANATLYIVGDIDNIPRIV 394

  Fly   320 -----VRHFSGIPHNEV-KAPDLSSF------------------------NYKDAFKAEFHEQVF 354
                 |...:|:.:... .:|...:|                        |..|..|....|:..
plant   395 HNIEAVFGKNGLDNESTPSSPSPGAFGAMANFLVPKLPAGLGGTFSNEKTNTADQSKMIKRERHA 459

  Fly   355 FVKPVENETKLELTWVLPNVRQYYRSKPDQFLSYLL---------------GYEGRGSLCAYLRR 404
            ...|||:      .|.||...  ...||.|...:.|               ..:..|.|...|.:
plant   460 IRPPVEH------NWSLPGTS--VDLKPPQIFKHELLQNFAINMFCKIPVSKVQTFGDLRNVLMK 516

  Fly   405 RLWALQLIAGIDENGFDMNSMYSLFN-----ICIYLTDEGFKNLDEVLAATFAYVKLFANCGSMK 464
            |::...|       .|.:|:.|...|     :.:..:|.|.:..........|..:.:.|  ::|
plant   517 RIFLSAL-------HFRINTRYKSSNPPFTSVELDHSDSGREGCTVTTLTVTAEPQNWQN--AVK 572

  Fly   465 DVYEEQQRNEETGFRFHAQRPAFDNVQELVLNLKYFPPKDILTGKELYYEYNEEHLKELISHLNE 529
            ...:|.:|.:|    |...|.......:.:|       ||            .|||..:|.:::.
plant   573 VAVQEVRRLKE----FGVTRGELTRYMDALL-------KD------------SEHLAAMIDNVSS 614

  Fly   530 M-KFNLMVTSRRKYDDIS--AYDKTE--EWFGTEYATIPMPE------KWRKLWED----SVPLP 579
            : ..:.::.|    |.:|  ..|:|:  |.......|:.:.|      |..:...|    :.|||
plant   615 VDNLDFIMES----DALSHTVMDQTQGHETLVAVAGTVTLEEVNTVGAKVLEFISDFGRPTAPLP 675

  Fly   580 ELFLP------------ESNKYVTDDFTLHWHSMG-------RPEVPDSPKLLIKTDTCELWFRQ 625
            ...:.            ||:..::.|..:.....|       .||:....:|:.::...||..::
plant   676 AAIVACVPTKVHVDGVGESDFNISPDEIIESVKSGLLAPIEAEPELEVPKELISQSQLKELTLQR 740

  Fly   626 DDKF-DLPEAHMAFYFISPMQRQNAKNDAMCSLYEEMVRFHVCEELYPAISAGL--SYSLSTIEK 687
            :..| .:|.        |.:.:.:.|...:..|               .:|.|:  :|..||.|.
plant   741 NPCFVPIPG--------SGLTKLHDKETGITQL---------------RLSNGIAVNYKKSTTES 782

  Fly   688 --GLLLKVCGYNEKLHLIVEAIAEGMLNV-AETLDE-NMLSAFVKNQRKAF-------------- 734
              |::..:.|......   .:.::|.:.| ..||.| ..:..|.:.|.:.|              
plant   783 RAGVMRLIVGGGRAAE---TSDSKGAVVVGVRTLSEGGRVGDFSREQVELFCVNHLINCSLESTE 844

  Fly   735 ------FNALIKPKALNRDIRL--CVLERIRWLMINKYKCLSSVILEDMREFAHQFPKELYIQSL 791
                  |...::...:....:|  .||||..|             |||..:.|.|    ||:...
plant   845 EFIAMEFRFTLRDNGMQAAFQLLHMVLERSVW-------------LEDAFDRARQ----LYLSYF 892

  Fly   792 --IQGNYTEESAHNVMNSLLSRLNCKQIRERGRFLEDITVKLPVGTSIIRCHALNVQDTNTVITN 854
              |..:....:||.:|   ::.||..:     ||:|      |...|:   .:||::.....:.:
plant   893 RSIPKSLERATAHKLM---IAMLNGDE-----RFVE------PTPKSL---QSLNLESVKDAVMS 940

  Fly   855 FYQIGPNTVRVESILDLLMMFVDEPLFDQLRT 886
            .: :|.| :.|..:.|.....::..:.|.|.|
plant   941 HF-VGDN-MEVSIVGDFSEEEIERCILDYLGT 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrd1NP_572757.2 Ptr 55..1030 CDD:440648 178/877 (20%)
SPPNP_199054.1 PqqL 193..661 CDD:440377 110/504 (22%)
PqqL 753..1233 CDD:440377 52/272 (19%)

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