DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrd1 and Ide

DIOPT Version :10

Sequence 1:NP_572757.2 Gene:Nrd1 / 32143 FlyBaseID:FBgn0030344 Length:1147 Species:Drosophila melanogaster
Sequence 2:XP_036017339.1 Gene:Ide / 15925 MGIID:96412 Length:1044 Species:Mus musculus


Alignment Length:1053 Identity:284/1053 - (26%)
Similarity:498/1053 - (47%) Gaps:145/1053 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RRSPITQLAGVRAITYSSLC-----KMTDQVKYLDIPDKSETDKKLYKTLLLGNGLHALIVSDPS 81
            |..|..:|.|....|||::.     ::.||:.      ||..||:.|:.|.|.||:..|::||| 
Mouse    49 RPPPAKRLCGFPKQTYSTMSNPAIQRIEDQIV------KSPEDKREYRGLELANGIKVLLISDP- 106

  Fly    82 PMPHDGFTTSESSSSKSTVSTSSSIISRSESTSSTSTDSESSEESSSEEGDEKLAACALLIDYGS 146
                   ||.:||:                                           ||.:..||
Mouse   107 -------TTDKSSA-------------------------------------------ALDVHIGS 121

  Fly   147 FAEPTKYQGLAHFLEHMIFMGSEKYPKENIFDAHIKKCGGFANANTDCEDTLFYFEVAEKHLDSS 211
            .::|....||:||.|||:|:|::||||||.:...:.:..|.:||.|..|.|.:||:|:.:||:.:
Mouse   122 LSDPPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGA 186

  Fly   212 LDYFTALMKAPLMKQEAMQRERSAVDSEFQQILQDDETRRDQLLASLATKGFPHGTFAWGNMKSL 276
            ||.|......||.......||.:|||||.::.:.:|..|..||..:......|...|..||..:|
Mouse   187 LDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTL 251

  Fly   277 --KENVDDAELHKILHEIRKEHYGANRMYVCLQARLPIDELESLVVRHFSGIPHNEVKAPDLSSF 339
              :.|.:..::.:.|.:....:|.:|.|.:|:..|..:|:|.:|||:.||.:.:..|..|:..  
Mouse   252 ETRPNQEGIDVREELLKFHSTYYSSNLMAICVLGRESLDDLTNLVVKLFSEVENKNVPLPEFP-- 314

  Fly   340 NYKDAFKAEFHEQVFFVKPVENETKLELTWVLPNVRQYYRSKPDQFLSYLLGYEGRGSLCAYLRR 404
              :..|:.|...|::.:.|:::...|.:|:.:|:::|||:|.|..:|.:|:|:||.|||.:.|:.
Mouse   315 --EHPFQEEHLRQLYKIVPIKDIRNLYVTFPIPDLQQYYKSNPGHYLGHLIGHEGPGSLLSELKS 377

  Fly   405 RLWALQLIAGIDE--NGFDMNSMYSLFNICIYLTDEGFKNLDEVLAATFAYVKLFANCGSMKDVY 467
            :.|...|:.|..|  .||    |:.:.|  :.||:||..::::::...|.|::.....|..:.|:
Mouse   378 KGWVNTLVGGQKEGARGF----MFFIIN--VDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVF 436

  Fly   468 EEQQRNEETGFRFHAQRPAFDNVQELVLNLKYFPPKDILTGKELYYEYNEEHLKELISHLNEMKF 532
            :|.:......|||..:........::...|.|:|...:||.:.|..|:..:.:..::..|.....
Mouse   437 QECKDLNAVAFRFKDKERPRGYTSKIAGKLHYYPLNGVLTAEYLLEEFRPDLIDMVLDKLRPENV 501

  Fly   533 NLMVTSRRKYDDISAYDKTEEWFGTEYATIPMPEKWRKLWEDSVPLPELFLPESNKYVTDDFTLH 597
            .:.:.| :.::  ...|:||:|:||:|....:||...:.|:::....:..||..|:::..:|.: 
Mouse   502 RVAIVS-KSFE--GKTDRTEQWYGTQYKQEAIPEDIIQKWQNADLNGKFKLPTKNEFIPTNFEI- 562

  Fly   598 WHSMGRPEVPDSPKLLIKTDTCELWFRQDDKFDLPEAHMAFYFISPMQRQNAKNDAMCSLYEEMV 662
             .|:.:...| .|.|:..|...:|||:|||||.||:|.:.|.|.|.....:..:..|..|:..::
Mouse   563 -LSLEKDATP-YPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSRYLYADPLHCNMTYLFIRLL 625

  Fly   663 RFHVCEELYPAISAGLSYSLSTIEKGLLLKVCGYNEKLHLIVEAIAEGMLNVAETLDENMLSAFV 727
            :..:.|..|.|..:||||::::....:||.|.|||:|..::::.|.|.|...  .:|:...... 
Mouse   626 KDDLKEYTYAARLSGLSYAIASGMNAILLSVKGYNDKQPILLKKITEKMATF--EIDKKRFEII- 687

  Fly   728 KNQRKAFFNALIKPKALNRD------IRLCVLERIRWLMINKYKCLSSVILEDMREFAHQFPKEL 786
               ::|:..:|...:|....      :||.:.| :.|......:.|..|.|..::.|..|....|
Mouse   688 ---KEAYMRSLNNFRAEQPHQHAMYYLRLLMTE-VAWTKDELKEALDDVTLPRLKAFIPQLLSRL 748

  Fly   787 YIQSLIQGNYTEESAHNVM----NSLLSRLNCK-------------QIRERGRFLEDITVKLPVG 834
            :|::|:.||.|:::|..||    ::|:...:.|             |:.:||.|:          
Mouse   749 HIEALLHGNITKQAALGVMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFV---------- 803

  Fly   835 TSIIRCHALNVQDTNTVITN-----FYQIGPNTVRVESILDLLMMFVDEPLFDQLRTKEQLGYHV 894
                      .|..|.|..|     :||....:......|:|....:.||.|:.|||||||||.|
Mouse   804 ----------YQQRNEVHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIV 858

  Fly   895 GATVRLNYGIAGYSIMVNSQETKTTADYVEGRIEVFRAKMLQILRHLPQDEYEHTRDSLIKLKLV 959
            .:..|...||.|...::.|::   ...|:|.|:|.|...|.:.:..:.::.::....:|...:|.
Mouse   859 FSGPRRANGIQGLRFIIQSEK---PPHYLESRVEAFLITMEKAIEDMTEEAFQKHIQALAIRRLD 920

  Fly   960 ADLALSTEMSRNWDEIINESYLFDRRRRQIEVLRTLQKDEIINF---VISIDGDNMRKLSVQVIG 1021
            ....||.|.::.|.|||::.|.:||...::..|:||.||:||.|   ::::|.....|:||.|:.
Mouse   921 KPKKLSAECAKYWGEIISQQYNYDRDNIEVAYLKTLTKDDIIRFYQEMLAVDAPRRHKVSVHVLA 985

  Fly  1022 HRPAGMPEPLCGE 1034
            ......  |:.||
Mouse   986 REMDSC--PVVGE 996

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrd1NP_572757.2 Ptr 55..1030 CDD:440648 272/1009 (27%)
IdeXP_036017339.1 Ptr 70..1031 CDD:440648 277/1032 (27%)

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