DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATP7 and PCA1

DIOPT Version :9

Sequence 1:NP_001259466.1 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_009854.2 Gene:PCA1 / 852598 SGDID:S000000499 Length:1216 Species:Saccharomyces cerevisiae


Alignment Length:983 Identity:247/983 - (25%)
Similarity:433/983 - (44%) Gaps:243/983 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 ANVVTAENIAKSITELGFPTELIDEPDNGEAEVELEIMGMTCASCVNKIES--------HVLK-- 308
            :.:|:.|.|...:.        ::....|...:.|.:.||:|..|.:|::.        |.||  
Yeast   388 SRIVSMEPIENHLN--------LEAGSTGTEHIVLSVSGMSCTGCESKLKKSFGALKCVHGLKTS 444

  Fly   309 ------------IRGVTTASVTLLTKRGKFRY---------------------ITEETGPRSICE 340
                        .:|.....:..|:|..:|:|                     |.|| .|:.:.|
Yeast   445 LILSQAEFNLDLAQGSVKDVIKHLSKTTEFKYEQISNHGSTIDVVVPYAAKDFINEE-WPQGVTE 508

  Fly   341 A------IEALGFEAKLMTGRDKMAHNYLEHKEEIRKWRNAFLVSLIFGGPCMVA--MIYFMLEM 397
            .      |..:.|:.|::..||                    ||:..:..|..:|  ..:..:|:
Yeast   509 LKIVERNIIRIYFDPKVIGARD--------------------LVNEGWSVPVSIAPFSCHPTIEV 553

  Fly   398 SDKGHANMCC---LVPGLSMENLVM----------------FLLSTPVQFFGGFHFYVQSYRA-I 442
            ..|....:.|   |...|::..|||                .:|:|.:||.....||:.:.:: |
Yeast   554 GRKHLVRVGCTTALSIILTIPILVMAWAPQLREKISTISASMVLATIIQFVIAGPFYLNALKSLI 618

  Fly   443 KHGTTNMDVLISMVTTISYVYSVA-----VVIAAVLLEQNSSPLTFFDTPPMLLIFISLGRWLEH 502
            ......||:||.:.|:.:|::|:.     ||...:..||      ||:|..:|:..|.:||::..
Yeast   619 FSRLIEMDLLIVLSTSAAYIFSIVSFGYFVVGRPLSTEQ------FFETSSLLVTLIMVGRFVSE 677

  Fly   503 IAKGKTSEALSKLLSLKAADALLVEISPDFDIISEKVISVDYVQRGDILKVIPGAKVPVDGKVLY 567
            :|:.:..:::| :.||:|:.|:||:.:.     .|..|::..:|.|||.||:|.:::|.||.|:.
Yeast   678 LARHRAVKSIS-VRSLQASSAILVDKTG-----KETEINIRLLQYGDIFKVLPDSRIPTDGTVIS 736

  Fly   568 GHSSCDESLITGESMPVAKRKGSVVIGGSINQNGVLLVEATHTGENTTLAQIVRLVEEAQTSKAP 632
            |.|..||:|||||||||.|:..|:|:.||:|..|.|.|:.:....|.|::.|..:|:||:.:|..
Yeast   737 GSSEVDEALITGESMPVPKKCQSIVVAGSVNGTGTLFVKLSKLPGNNTISTIATMVDEAKLTKPK 801

  Fly   633 IQQLADRIAGYFVPFVVVVSSITLIAWIIIGFSNPNLVPVAMEHKMHMDQNTIIVSYAFKCALSV 697
            ||.:||:||.||||.::.::.:|...||.:|        :.:|.:...|    .|..|...|::|
Yeast   802 IQNIADKIASYFVPTIIGITVVTFCVWIAVG--------IRVEKQSRSD----AVIQAIIYAITV 854

  Fly   698 LAIACPCALGLATPTAVMVATGTGAINGVLVKGATALENAHKVKTVVFDKTGTITHGTPMTSKVT 762
            |.::|||.:|||.|...::|:|..|..||:.|.|.::|.||....||||||||:|.|     |:|
Yeast   855 LIVSCPCVIGLAVPIVFVIASGVAAKRGVIFKSAESIEVAHNTSHVVFDKTGTLTEG-----KLT 914

  Fly   763 LFVTAQVCSLARALTIVGAAEQNSEHPIASAIVHFAKDMLNVGATPQAGSFGKSSHFQAVPGCGI 827
            :...........:.:::....:..:||::.||..:.|:.   |.:.|     ..|:.:||  .|.
Yeast   915 VVHETVRGDRHNSQSLLLGLTEGIKHPVSMAIASYLKEK---GVSAQ-----NVSNTKAV--TGK 969

  Fly   828 RVTVSNYEQTLRQACNADRIINYENLHRTHPQGSVPVDNGASIEHLLPQRSVRKSMELNNQQLLS 892
            ||..::|.....|..|. |.:.:.|                       ...|||::|        
Yeast   970 RVEGTSYSGLKLQGGNC-RWLGHNN-----------------------DPDVRKALE-------- 1002

  Fly   893 DLVLEPEEELLTDQKIIDSPEILVLIGNREWMERNAIEVPLEISDCMTHEERKGHTAVLCALNGQ 957
                                                                :|::....::||.
Yeast  1003 ----------------------------------------------------QGYSVFCFSVNGS 1015

  Fly   958 LVCMFAVSDMVKPEAHLAVYTLKRMGIDVVLLTGDNKNTAASIAREVGIRT--VYAEVLPSHKVA 1020
            :..::|:.|.::.:|...:..|::.||.:.:|:||:.....|:|..:||.:  :.:...|:.|..
Yeast  1016 VTAVYALEDSLRADAVSTINLLRQRGISLHILSGDDDGAVRSMAARLGIESSNIRSHATPAEKSE 1080

  Fly  1021 KIQRI----------QANGIRVAMVGDGVNDSPALAQADVGITIAAGTDVAAEASDIVLMRNDLL 1075
            .|:.|          |:....|...|||.||:..|.||.:|:.|..|::||..|:|:|:::..|.
Yeast  1081 YIKDIVEGRNCDSSSQSKRPVVVFCGDGTNDAIGLTQATIGVHINEGSEVAKLAADVVMLKPKLN 1145

  Fly  1076 DVVACLDLSRCTVRRIRYNFFFASMYNLLGIPLASGLFAPYGFTLLPWMASVAMAASSVSVVCSS 1140
            :::..:.:|:..:.|::.||.::..|||..|.||:|.|.  .|.:.|..|.:....|.:.|:..:
Yeast  1146 NILTMITVSQKAMFRVKLNFLWSFTYNLFAILLAAGAFV--DFHIPPEYAGLGELVSILPVIFVA 1208

  Fly  1141 LLLKMYRK 1148
            :||: |.|
Yeast  1209 ILLR-YAK 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP7NP_001259466.1 HMA 16..78 CDD:238219
HMA 97..159 CDD:238219
HMA 214..274 CDD:238219 3/19 (16%)
ZntA 285..1131 CDD:225127 237/933 (25%)
HMA 287..350 CDD:238219 21/111 (19%)
E1-E2_ATPase 489..735 CDD:278548 89/245 (36%)
COG4087 <984..1085 CDD:226572 31/112 (28%)
PCA1NP_009854.2 HMA 413..471 CDD:238219 11/57 (19%)
ATPase-IB1_Cu 605..1193 CDD:273664 196/712 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2217
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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