DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP7 and HMA3

DIOPT Version :10

Sequence 1:NP_572756.3 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster
Sequence 2:NP_194741.2 Gene:HMA3 / 829135 AraportID:AT4G30120 Length:542 Species:Arabidopsis thaliana


Alignment Length:577 Identity:146/577 - (25%)
Similarity:253/577 - (43%) Gaps:107/577 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   289 EIMGMTCASCVNKIESHVLKIRGVTTASVTLLTKRGKFRYITEETGPRSICEAIEALGFEAKLMT 353
            :::|:.|:|.|:.:.:.:.::.||...||.:.::.....:.|....|..|.:|:.....||.:..
plant    18 DVVGICCSSEVSIVGNVLRQVDGVKEFSVIVPSRTVIVVHDTFLISPLQIVKALNQARLEASVRP 82

  Fly   354 -GRDKMAHNYLEHKEEIRKWRNAFLVSLIFGGPCMVAMIYFMLEMSDKGHANMCCLVPGLSMENL 417
             |...:.          .:|.:.|  :::.|  .::.:.:|....|......:..:|.|      
plant    83 YGETSLK----------SQWPSPF--AIVSG--VLLVLSFFKYFYSPLEWLAIVAVVAG------ 127

  Fly   418 VMFLLSTPVQFFGGFHFYVQSYRAIKHGTTNMDVLISMVTTISYVYSVAVVIAAVLLEQNSSPLT 482
            |..:|:..|.                 ..|...:.|:.:|.|:       |||.:.::.      
plant   128 VFPILAKAVA-----------------SVTRFRLDINALTLIA-------VIATLCMQD------ 162

  Fly   483 FFDTPPMLLIFISLGRWLEHIAKGKTSEALSKLLSLKAADALLVEISPDFDIISEKVISVDYVQR 547
            |.:...::.:| |:..|||..|..|.|..:|.|:||....|::.:...:.|        ||.|..
plant   163 FTEAATIVFLF-SVADWLESSAAHKASIVMSSLMSLAPRKAVIADTGLEVD--------VDEVGI 218

  Fly   548 GDILKVIPGAKVPVDGKVLYGHSSCDESLITGESMPVAKRKGSVVIGGSINQNGVLLVEATHTGE 612
            ..::.|..|..:|:||.|:.|....||..:||||.||:|::.|.|:..:||.||.:.|:.|....
plant   219 NTVVSVKAGESIPIDGVVVDGSCDVDEKTLTGESFPVSKQRESTVMAATINLNGYIKVKTTALAR 283

  Fly   613 NTTLAQIVRLVEEAQTSKAPIQQLADRIAGYFVPFVVVVSSITLIAWIIIGFSNPNLVPVAMEHK 677
            :..:|::.:||||||.|:...|:..|:.:.|:.|.|||.::...:            :||.::.:
plant   284 DCVVAKMTKLVEEAQKSQTKTQRFIDKCSRYYTPAVVVSAACFAV------------IPVLLKVQ 336

  Fly   678 MHMDQNTIIVSYAFKCALSVLAIACPCALGLATPTAVMVATGTGAINGVLVKGATALENAHKVKT 742
                    .:|:.|..||.||...|||.|.|:||.|...|....|.:|.|:|....||...|:|.
plant   337 --------DLSHWFHLALVVLVSGCPCGLILSTPVATFCALTKAATSGFLIKTGDCLETLAKIKI 393

  Fly   743 VVFDKTGTITHGTPMTSKVTLFVTAQVCSLARALTI------VGAAEQNSEHPIASAIVHFAKDM 801
            |.||||||||...        |:.:...||:.::.:      |.:.|..|.||:|:|::.:|:  
plant   394 VAFDKTGTITKAE--------FMVSDFRSLSPSINLHKLLYWVSSIECKSSHPMAAALIDYAR-- 448

  Fly   802 LNVGATPQAGSFGKSSHFQAVPGCGI-------RVTVSNYEQTLRQACNADRIINYE 851
             :|...|:....   .:||..||.|:       .:.:.|.....|..|..|.:.:.|
plant   449 -SVSVEPKPDIV---ENFQNFPGEGVYGRIDGQDIYIGNKRIAQRAGCLTDNVPDIE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP7NP_572756.3 CopZ 11..76 CDD:442020
HMA 97..159 CDD:238219
chaper_CopZ_Eh 212..276 CDD:411374
HMA 287..350 CDD:238219 13/60 (22%)
P-type_ATPase_Cu-like 376..1130 CDD:319783 130/489 (27%)
HMA3NP_194741.2 CopZ 13..74 CDD:442020 12/55 (22%)
Haloacid Dehalogenase-like Hydrolases 96..>542 CDD:473868 130/489 (27%)
Blue background indicates that the domain is not in the aligned region.

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