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Protein Alignment p24-1 and Tmed10

DIOPT Version :10

Sequence 1:	NP_572754.1	Gene:	p24-1 / 32140	FlyBaseID:	FBgn0030341	Length:	210	Species:	Drosophila melanogaster
Sequence 2:	NP_445919.1	Gene:	Tmed10 / 84599	RGDID:	620970	Length:	219	Species:	Rattus norvegicus

Alignment Length:	198	Identity:	53/198 - (26%)
Similarity:	87/198 - (43%)	Gaps:	23/198 - (11%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 SAVEFTFDLADNAVDCFYEEIKKN---SSAYFEFQVSAG-GQLDVDVTLKDPQGKVIYSLEKATF 78
            |.:..:|.|..|:..|..|||.|:   :.||.....|.| |.|...:.:.|..|.::|:.|.||.
  Rat    28 SVLGISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATK 92

  Fly    79 DSHQFVAETTGVYTACFGNQFSA-FSHKIVYVDFQVGEEPALPGVDEHATV---------LTQME 133
            ....|..|...::..||.::.:. ...::|.:|.:.|.|  ....:|.|.|         |.::|
  Rat    93 GKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVE--AKNYEEIAKVEKLKPLEVELRRLE 155

  Fly   134 TSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIVIGLVQIMVLRNFFT 198
            ..|::|   :||.    .:.:.||.:.|...|..|.||:.:|......:|.:...|:..||.||.
  Rat   156 DLSESI---VNDF----AYMKKREEEMRDTNESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFFK 213

  Fly   199 DRK 201
            .:|
  Rat   214 AKK 216

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.