DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and p24delta5

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_173608.1 Gene:p24delta5 / 838792 AraportID:AT1G21900 Length:216 Species:Arabidopsis thaliana


Alignment Length:195 Identity:50/195 - (25%)
Similarity:83/195 - (42%) Gaps:46/195 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 CFYEEIKKNSSAYFEFQVSAGGQLD---------VDVTLKDPQGKVIYSLEKATFDSHQFVAETT 88
            |..|||:.|.....::.|     :|         |...:..|.|..::..|..|.....|..:..
plant    40 CVSEEIQSNVVVLADYYV-----VDEHNPENTPAVSSKVTSPYGNNLHHQENVTHGQFAFTTQEA 99

  Fly    89 GVYTACFGNQFSAFSHKI-----VYVDFQVG----------EEPALPGVDEHATVLTQMETSSQA 138
            |.|.|||   :...||.:     :.||:::|          ::..:.||:   ..|.::|....:
plant   100 GNYLACF---WIDSSHHLANPITLGVDWKMGIAAKDWDSVAKKEKIEGVE---LQLRRLEGLVLS 158

  Fly   139 IHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLET--AAVIVIGLVQIMVLRNFFTDRK 201
            |.:.||.|.|       |||:.|:.:|..|.|| .|.|:.:  ..|:|:| .||:.|:.:|..:|
plant   159 IRENLNYIKD-------REAEMREVSETTNSRV-AWFSIMSLGVCVVVVG-SQILYLKRYFHKKK 214

  Fly   202  201
            plant   215  214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 48/189 (25%)
p24delta5NP_173608.1 EMP24_GP25L 27..210 CDD:426051 48/189 (25%)

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