DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p24-1 and AT1G14010

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_172854.1 Gene:AT1G14010 / 837961 AraportID:AT1G14010 Length:212 Species:Arabidopsis thaliana


Alignment Length:211 Identity:56/211 - (26%)
Similarity:87/211 - (41%) Gaps:28/211 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VALMMHCISAVEFT--FDLADNAVDCFYEEIKKNSSAYFEFQV---------SAGGQLDVDVTLK 63
            |.|::..:|.|..:  ::|......|..|||..|:....::.:         .:..::.|.||  
plant     9 VLLILSILSPVTLSIRYELLSGHTKCISEEIHANAMTIGKYSIINPHEDHPLPSSHKVTVRVT-- 71

  Fly    64 DPQGKVIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHK-----IVYVDFQVG-EEPALPGV 122
            .|||...:..:........|||..||.|.:|    |||..||     |:..|::.| .......|
plant    72 SPQGTAYHESDGVESGQFSFVAVETGDYISC----FSAVDHKPETTLIIDFDWRTGIHTKDWSNV 132

  Fly   123 DEHATVLTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVI--VI 185
            .:.:.|.| ||...:.:.:.:|.|.|...:.|.||.:........|.: |.|.|..:.||.  |.
plant   133 AKKSQVET-MEFEVKKLFETVNGIHDEMFYLRDREEEMHNLNIATNSK-MAWLSFVSLAVCLSVA 195

  Fly   186 GLVQIMVLRNFFTDRK 201
            || |...|:.||..:|
plant   196 GL-QFWHLKTFFQKKK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 49/194 (25%)
AT1G14010NP_172854.1 EMP24_GP25L 22..207 CDD:426051 50/193 (26%)

Return to query results.
Submit another query.