DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and AT2G03040

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_178404.1 Gene:AT2G03040 / 814833 AraportID:AT2G03040 Length:166 Species:Arabidopsis thaliana


Alignment Length:161 Identity:33/161 - (20%)
Similarity:60/161 - (37%) Gaps:34/161 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TQIVVFAVALMMHCISAVEFTFDLADNAVDCFYEEIKKNSSA---YF-----EFQVSAGGQLDVD 59
            :.|::..:||:..  ..:...::|..:...|..|||.:|:.:   ||     |..........:.
plant     6 SSILLLIIALLSP--RTLSMRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDHHPLPDSHKII 68

  Fly    60 VTLKDPQGKVIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHK-----IVYVDFQVGEEPAL 119
            |.:..||||.::..:........|.|...|.|.||    .:|..:|     .:..|::.|     
plant    69 VKVMPPQGKNLHEADNVEAGQFSFTAYENGSYVAC----ITAIDYKPETTLTIDFDWKTG----- 124

  Fly   120 PGVDEHATVLTQMETSSQAIHKGLNDILDAQ 150
                .|:...|.:...||.      |:::.|
plant   125 ----VHSKEWTNVAKKSQV------DMMEYQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 30/143 (21%)
AT2G03040NP_178404.1 EMP24_GP25L 22..>166 CDD:426051 30/143 (21%)

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