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Protein Alignment p24-1 and Tmed11

DIOPT Version :9

Sequence 1:	NP_001259465.1	Gene:	p24-1 / 32140	FlyBaseID:	FBgn0030341	Length:	210	Species:	Drosophila melanogaster
Sequence 2:	NP_080385.2	Gene:	Tmed11 / 67366	MGIID:	1914616	Length:	215	Species:	Mus musculus

Alignment Length:	212	Identity:	48/212 - (22%)
Similarity:	91/212 - (42%)	Gaps:	21/212 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 VALMMHCIS---AVEFTFDLADNAVDCFYEEIKKNSSAYFEFQV------------SAGGQLDVD 59
            :..::.|.|   :..|.|...:....|..|:|..::.....|:|            ||.| |.:.
Mouse     3 IQTILLCFSFSFSAAFYFHAGEREEKCIIEDIPSDTLITGTFKVQQWDIVRHDFLESAPG-LGMF 66

  Fly    60 VTLKDPQGKVIYSLEKATFDSHQFVAETTGVYTACF---GNQFSAF--SHKIVYVDFQVGEEPAL 119
            ||:.....:|:.|.......:..|.:.::|.:..|.   ..||.:|  |...:::|.:|||....
Mouse    67 VTVTTYNDEVLLSKLYGAQGTFYFTSHSSGEHIICLESNSTQFVSFGGSKLRIHLDIRVGEHDLD 131

  Fly   120 PGVDEHATVLTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIV 184
            ..:.:....:.::....|.:.:.:..||..|.:.|.||...|..:||.|:.|:.|:..:....|.
Mouse   132 AAIVQAKDKVNEVTFKLQHLIEQVEQILKEQDYQRDREENFRITSEDTNRNVLWWAFAQILIFIS 196

  Fly   185 IGLVQIMVLRNFFTDRK 201
            :|:.|:..|::||..:|
Mouse   197 VGIFQMKHLKDFFIAKK 213

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.