DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and bai

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_651323.3 Gene:bai / 42996 FlyBaseID:FBgn0045866 Length:206 Species:Drosophila melanogaster


Alignment Length:207 Identity:55/207 - (26%)
Similarity:90/207 - (43%) Gaps:22/207 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FAVALMMHCI-SAVEFTFDLADNAVDCFYEEIKKNSSAYFEFQVS-AGGQLDVDVTLKDPQGKVI 70
            |.|.|:|.|. |:....|.|:.|...|..|:|:.|.....||:|| ..||: :|...:|.:|.::
  Fly     6 FIVCLLMACAWSSHAVMFKLSPNTQKCLKEDIQANQLVMGEFEVSDVPGQI-IDYIARDTKGHIL 69

  Fly    71 YSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHKIVYVDFQVG-------EEPALPGVDEHATV 128
            ...|..|.....|::|....|..||.::..|....::.   :|.       |..:..|:.| |:.
  Fly    70 SQKEHITKGKFSFMSEVYDTYEICFISKVPAHQRGVIQ---EVSLLTKKGVETKSYEGIGE-ASK 130

  Fly   129 LTQMETSSQAIHKGLNDILDAQTHH----RLREAQGRKRAEDLNQRVMVWSSLETAAVIVIGLVQ 189
            |..:|...    |.|.|:.|:....    |.||.:.|...|..|.||:.:|......::.:...|
  Fly   131 LKPLEVDL----KRLEDLSDSIVRDFVLMRKREEEMRDTNEKTNSRVLFFSIFSMCCLLGLATWQ 191

  Fly   190 IMVLRNFFTDRK 201
            ::.||.:|..:|
  Fly   192 VLYLRRYFKAKK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 47/187 (25%)
baiNP_651323.3 EMP24_GP25L 20..200 CDD:426051 47/188 (25%)

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