DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p24-1 and tmed7

DIOPT Version :9

Sequence 1:NP_001259465.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001300637.1 Gene:tmed7 / 405848 ZFINID:ZDB-GENE-040426-2570 Length:216 Species:Danio rerio


Alignment Length:205 Identity:99/205 - (48%)
Similarity:129/205 - (62%) Gaps:4/205 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QIVVFAVALMMHCISAVEFTFDLADNAVDCFYEEIKKNSSAYFEFQVSAGGQLDVDVTLKDPQGK 68
            |:|:..|.|.    ||.|.||:|.|||..||||:|...:....||||..||..|||..|:||:|.
Zfish    15 QVVMMKVGLS----SASELTFELPDNAKQCFYEDITIGTKCTLEFQVVTGGHYDVDCRLEDPEGT 75

  Fly    69 VIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHKIVYVDFQVGEEPALPGVDEHATVLTQME 133
            |:|...|..:||..|.|...|.|..||.|:||.|:||.||.|||||::|.|...:...|.|||||
Zfish    76 VLYKEMKKQYDSFTFSAARNGTYKFCFSNEFSTFTHKTVYFDFQVGDDPPLFPNENRVTALTQME 140

  Fly   134 TSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIVIGLVQIMVLRNFFT 198
            ::..:||:.|..::|.|||.||||||||.||||||.||..||..|...::|:.:.|:::||:||:
Zfish   141 SACVSIHEALKSVMDYQTHFRLREAQGRSRAEDLNSRVAFWSVGEALILLVVSVSQVLLLRSFFS 205

  Fly   199 DRKPSQAHYG 208
            |||.:....|
Zfish   206 DRKTTTTRMG 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_001259465.1 EMP24_GP25L 21..197 CDD:279450 87/175 (50%)
tmed7NP_001300637.1 EMP24_GP25L 28..205 CDD:279450 88/176 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585517
Domainoid 1 1.000 183 1.000 Domainoid score I3369
eggNOG 1 0.900 - - E1_KOG1693
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H45644
Inparanoid 1 1.050 196 1.000 Inparanoid score I3790
OMA 1 1.010 - - QHG52485
OrthoDB 1 1.010 - - D1292519at2759
OrthoFinder 1 1.000 - - FOG0000272
OrthoInspector 1 1.000 - - otm24233
orthoMCL 1 0.900 - - OOG6_103696
Panther 1 1.100 - - LDO PTHR22811
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1790
SonicParanoid 1 1.000 - - X1789
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

Return to query results.
Submit another query.