DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and CG9308

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster


Alignment Length:206 Identity:51/206 - (24%)
Similarity:84/206 - (40%) Gaps:18/206 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNTQIVVFAVALMMHCISAVEFTFDLADNAVDCFYEEIKKNSSAYFEFQVSAGGQLDVDVTLKDP 65
            |.:.||:..|.....|    .|...|..:...|||:....:......|:|..||..||.|.:..|
  Fly     1 MLSAIVLVLVLFQAAC----GFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGGFKDVGVEIAGP 61

  Fly    66 QGKVIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHKIVY--------VDFQVGEEPALPGV 122
            ....::..::.|..|..|.|...|.|..||.|:.|..:.||:.        ::|.:.....:..|
  Fly    62 DDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDSSKRVDDV 126

  Fly   123 DEHATVLTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQ-RVMVWSSLETAAVIVIG 186
            .|.|||.:.:...|..:  |...:.....|.|.|   |.....|:.: ||:.||......:|:..
  Fly   127 IEQATVQSMINQLSAKL--GAVKMEQEYMHFRYR---GHLEVSDMVELRVLAWSIFGPMMLIITA 186

  Fly   187 LVQIMVLRNFF 197
            ::::..|::||
  Fly   187 VLEVYYLKHFF 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 44/184 (24%)
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 46/186 (25%)

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