DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and opm

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_572994.1 Gene:opm / 32435 FlyBaseID:FBgn0264389 Length:242 Species:Drosophila melanogaster


Alignment Length:206 Identity:62/206 - (30%)
Similarity:91/206 - (44%) Gaps:40/206 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EFTFDLADNAVDCFYEEIKKNSSAYFEFQVSAG--GQLDVDVTLKDPQGKVIYSLEKATFDSHQF 83
            |.|..:.....:|.|..:::..:..||:||..|  |.||:..||.||.|.||.|..|...:.|:.
  Fly    33 EMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGHGDLDISFTLLDPIGLVIVSDFKKPENVHRH 97

  Fly    84 VAETTGVYTACFGNQFSAFSHKIVYV-------------DFQVGEEPALPGV--DEH-------- 125
            .....|.|..||.|.||.|:.|.|:.             |.|..|...|.|:  ||:        
  Fly    98 EVAKEGDYRFCFDNSFSMFNRKTVFFELIVEREGEELQGDTQWNEADELTGLSRDEYYDMKVQDI 162

  Fly   126 ----ATVLTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIVIG 186
                ..:..|:..:.|     |.|:|      |..||:.|..||...|:|..||.::.:|:|.:|
  Fly   163 MDFIGRIRLQLTKARQ-----LQDVL------RSHEARDRNLAESNFQKVNHWSMVQISAMIGVG 216

  Fly   187 LVQIMVLRNFF 197
            |:|:.:||:.|
  Fly   217 LIQVFMLRSIF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 61/204 (30%)
opmNP_572994.1 EMP24_GP25L 33..227 CDD:426051 61/204 (30%)

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