DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and p24-2

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster


Alignment Length:208 Identity:51/208 - (24%)
Similarity:91/208 - (43%) Gaps:31/208 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNTQIVVFAVALMMHCI--SAVEFTFDLADNAVDCFYEEIKKNSSAYFEFQV------------S 51
            |..|.:..|:.|   |:  ||....|.::.....||.||:...::....::|            |
  Fly     1 MRDQFISLALIL---CVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPS 62

  Fly    52 AGGQLDVDVTLKDPQGKVIYSLEKATFDSHQFVAETTGVYTAC-FGNQFSAFS--HKIVYVDFQV 113
            :.| :.:.|.::|...|::.|...::.....|.:.|.|.:..| |.|..:.||  ...|::|.||
  Fly    63 SPG-IGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQV 126

  Fly   114 GEEPALPGVDEHATV-----LTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMV 173
            ||...     ::|.|     ||:::...:.:...:..|...|.:.|.||.:.|..:|..|.||:.
  Fly   127 GEHAI-----DYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLW 186

  Fly   174 WSSLETAAVIVIG 186
            ||..:|..::.:|
  Fly   187 WSLAQTVVLVCMG 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 44/186 (24%)
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 44/186 (24%)

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