Protein Alignment p24-1 and Tmed1

DIOPT Version :9

• Sequence 1: NP_001259465.1
• Gene: p24-1 / 32140
• FlyBaseID: FBgn0030341
• Length: 210
• Species: Drosophila melanogaster
• Sequence 2: XP_006242706.1
• Gene: Tmed1 / 315461
• RGDID: 1311679
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 227
• Identity: 62/227 - (27%)
• Similarity: 90/227 - (39%)
• Gaps: 45/227 - (19%)

  Fly    21 EFTFDLADNAVDCFYEEIKKNSSAYFEFQ-----------------------------------V 50
            ||||.|......|||:....|:|...|:|                                   |
  Rat    33 EFTFLLPAGRKQCFYQSAPANASLETEYQFDNSRVEVENRLLQVALQSPQALLLYPKQRNGIFVV 97

  Fly    51 SAGGQLDVDVTLKDPQGKVIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHKIVYVD----- 110
            ..|..||||.||:.|||.::.|..:.....|.......|.|..||.|.||..|.|:|:.:
  Rat    98 IGGAGLDVDFTLESPQGVLLVSESRKADGVHTVEPTEAGDYRLCFDNSFSTISEKLVFFELIFDS 162

  Fly   111 FQVGEEPA--LPGVDEHATVLTQME---TSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQR 170
            ||..||..  ...|:....:..:||   .|.:.:...|...:...|..|..||:.|...||..:|
  Rat   163 FQDEEEVEGWAEAVEPEEMLDVKMEDIKESIETMRTRLERSIQMLTLLRAFEARDRNLQEDNLER 227

  Fly   171 VMVWSSLETAAVIVIGLVQIMVLRNFFTDRKP 202
            |..||:...|.::::.::|:..|:.||.|:.|
  Rat   228 VNFWSAANVAVLLLVAVLQVCTLKRFFHDKCP 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
p24-1	NP_001259465.1	EMP24_GP25L	21..197	CDD:279450	58/220 (26%)
Tmed1	XP_006242706.1	EMP24_GP25L	33..254	CDD:279450	58/220 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166344434
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1693
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1292519at2759
OrthoFinder	1	1.000	-	-		FOG0000272
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	5.750