DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and sel-9

DIOPT Version :10

Sequence 1:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_001370673.1 Gene:sel-9 / 179213 WormBaseID:WBGene00004766 Length:203 Species:Caenorhabditis elegans


Alignment Length:205 Identity:58/205 - (28%)
Similarity:96/205 - (46%) Gaps:10/205 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNTQIVVFAVALMMHCISAVEFTFDLADNAVDCFYEEIKKNSSAYFEFQVSAGGQLDVDVTLKDP 65
            ||:...:.||   :....|..:...:..|...||::.:...:.....|:|:.||.||:||.:..|
 Worm     1 MNSLTWILAV---LFVTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGP 62

  Fly    66 QGKVIYSLEKATFDSHQFVAETTGVYTACFGNQFSAFSHKIVYVDFQVGE-EPALPG--VDEHAT 127
            ..|.||..|:.:.....|.|...||||.||||:.|..:.|.|....::.| ....||  .::.|.
 Worm    63 DNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAA 127

  Fly   128 VLTQMETSSQAIHKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIVIGLV--QI 190
            ...::|...:.:...|..:...|.:..:||...|...|:.|.||::|::.|  |.:::|:.  ||
 Worm   128 DNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFE--AFVLVGMTVGQI 190

  Fly   191 MVLRNFFTDR 200
            ..|:.||..|
 Worm   191 FYLKRFFEVR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 50/180 (28%)
sel-9NP_001370673.1 EMP24_GP25L 18..198 CDD:426051 51/181 (28%)

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