DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-1 and TMED6

DIOPT Version :9

Sequence 1:NP_001259465.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster
Sequence 2:NP_653277.2 Gene:TMED6 / 146456 HGNCID:28331 Length:240 Species:Homo sapiens


Alignment Length:216 Identity:57/216 - (26%)
Similarity:85/216 - (39%) Gaps:57/216 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EFTFDLADNAVDCFYEEIKKNSSAYFEFQV--SAGGQLD--VDVTLKDPQGKVIYSLEKATFDSH 81
            :|...:.....:||::...:....||.::|  :.|...|  |..|..:|||.:|        |:.
Human    43 DFAIMIPPGGTECFWQFAHQTGYFYFSYEVQRTVGMSHDRHVAATAHNPQGFLI--------DTS 99

  Fly    82 Q-------FVAETTGVYTACFGNQFSAFSHKIVYVDFQVGEEPALPGVDEHATVLTQMETSSQAI 139
            |       |..:.||.|..|..||.:.|....||::|.|..|.  |..|.           .|..
Human   100 QGVRGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEG--PETDH-----------KQKE 151

  Fly   140 HKGLNDILDA----------QTHHRLRE---AQGRKRAE------DLNQRVMVWSSLETAAVIVI 185
            .|.|||.|||          ...|..|.   |:.||.|:      :.|. |..||:.::..:|:.
Human   152 RKQLNDTLDAIEDGTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNY-VNWWSTAQSLVIILS 215

  Fly   186 GLVQIMVLRNFF-----TDRK 201
            |::|:..|:..|     ||.|
Human   216 GILQLYFLKRLFNVPTTTDTK 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-1NP_001259465.1 EMP24_GP25L 21..197 CDD:279450 53/205 (26%)
TMED6NP_653277.2 EMP24_GP25L 43..228 CDD:279450 53/206 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1693
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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