DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:455 Identity:99/455 - (21%)
Similarity:174/455 - (38%) Gaps:86/455 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRL--VALNPFVL-----------EGEEWRHQ 133
            :||:.|..|.|:.:|.             ..:||:.  |..|.|.:           :.:.|..|
 Frog    90 ILVVSPEAVKELLMSP-------------KYSKDKFYDVIANMFGVRFMGKGLVTDRDYDHWHKQ 141

  Fly   134 RAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQAR 198
            |.:.....:...:............:|.:.:..|:.|..::...|:..|.|.:.:.....|::..
 Frog   142 RRIMDPAFSRTYLMGLMGPFNEKAEELMEKLMEKADGKCEIKMHDMLSRLTLDVIGKVAFGMELN 206

  Fly   199 TFTDN--PLPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKVFPRSHDRFYGQMISEALRL 261
            :..|:  |.|          :...|.:.|.|....|.:...|..:.|.|.        :.|::||
 Frog   207 SLNDDLTPFP----------KAISLVMKGIVEMRNPMVRYSLAKRGFIRK--------VQESIRL 253

  Fly   262 ----------RRSKHQERN-----DFINHLLE---MQRELDLSEEDMASHAMTFMFDGLDTTSNS 308
                      ||.|..:..     |.:..:|:   |:.|.|  .|.:..:.:||...|.:||:|.
 Frog   254 LRQTGKECIERRQKQIQDGEEIPVDILTQILKGAAMEEECD--PEILLDNFVTFFIAGQETTANQ 316

  Fly   309 IAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCT 373
            ::..::.|||||:...:...|:..|.......:.:.|..|.|||....|:||:||.....|:..|
 Frog   317 LSFVVMELGRNPEILEKAQAEIDEVIGSKRDIEYEDLGKLQYLSQVLKETLRLYPTAPGTSRGLT 381

  Fly   374 KEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFG 438
            ::..:.|      :|:.....:|:..|.:......|.:|..|.|:||.....|....   :..|.
 Frog   382 EDMVIDG------VKVPENVTIMLNSYIMGRMEQYYSDPLTFNPDRFSPDAPKPYYS---YFPFS 437

  Fly   439 NGPRQCVGMRLGLAMAKAALAAIVQRFEVVV----SPRTLNGTELDPLIFVGVHKGGIWLQFVPR 499
            .|||.|:|.......||..:|.::||:|..:    |.:.|:...|.||       .|:..:..||
 Frog   438 LGPRSCIGQVFSQMEAKVVMAKLLQRYEFELAEGQSFKILDTGTLRPL-------DGVICRLRPR 495

  Fly   500  499
             Frog   496  495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 96/441 (22%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 97/449 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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