DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp3a41a

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_059092.2 Gene:Cyp3a41a / 53973 MGIID:1858451 Length:504 Species:Mus musculus


Alignment Length:547 Identity:139/547 - (25%)
Similarity:243/547 - (44%) Gaps:90/547 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGSLLLG----IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNM---IWPRQHFTMDM 58
            :|.:|.|.    :|.:|..:|.:.....|.::::|:..|:.||..|:..|.   :|     ..||
Mouse     3 LFSALSLDTWVLLAIILVLLYRYGTRTHGLFKKQGIPGPKPLPFLGTVLNYYKGLW-----KFDM 62

  Fly    59 RDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENND-------ASKMVDIAKD 115
             :.|..|..|.   |.:..:.|..::.:|.::..:.| ..||.|.|..       .||.:.|:||
Mouse    63 -ECYEKYGKTW---GLFDGQMPLFVITDPEMIKNVLVKECFSVFTNRREFGPVGIMSKAISISKD 123

  Fly   116 RLVALNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLG 180
                        |||:..||:.|...|:|:::....::::....|.:::..::..||.:...|:.
Mouse   124 ------------EEWKRYRALLSPTFTSGKLKEMFPVIEQYGDILVKYLMQEAEKGKPVTMKDVL 176

  Fly   181 LRFTGESLFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGL--------AIAGAVHGLFPNLP-- 235
            ..::.:.:.....|:...:..:...|.|.       :.:|:        .:...|  |||.|.  
Mouse   177 GAYSIDVITSTSFGVNVDSLNNPEDPFVE-------KAKGILRVDFFDPLVFSVV--LFPFLTPV 232

  Fly   236 -RWLRPKVFPRSHDRFYGQMISEALRLR-RSKHQERNDFI-------NHLLEMQRELDLSEEDMA 291
             ..|...:||:....|:.:.::.....| .||.:.|.||:       |:..:......||:.::.
Mouse   233 YEMLNICMFPKDSIEFFKKFVNRMKESRLDSKQKHRVDFLQLMMNAHNNSKDKDSHKALSDMEIT 297

  Fly   292 SHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFN 356
            :.::.|:|.|.:|||::::..|..|..:||.|::|.||:....|....|..|.::::.||....|
Mouse   298 AQSIVFIFAGYETTSSTLSFTLYCLATHPDIQKKLQEEIDETLPNKAPPTYDTVMEMEYLDMVLN 362

  Fly   357 ESLRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFL 421
            |:||:||.|....:.|.|:.||.|.:      :..|..||:|.||||:||..:|||:.|:||||.
Mouse   363 ETLRLYPIGNRLERFCKKDVELNGVY------IPKGSTVMIPSYALHHDPQHWPEPEEFQPERFS 421

  Fly   422 DGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELD------ 480
            ... |......:::.||.|||.|:|||......|.||..::|.|.......|....:|.      
Mouse   422 KEN-KGSIDPYLYMPFGIGPRNCIGMRFAFMTMKLALTKVMQNFSFQPCQETQIPLKLSRQGLLQ 485

  Fly   481 ---PLIFVGVHKGGIWLQFVPRKNVTT 504
               |::          |:.|||..|.|
Mouse   486 PEKPIV----------LKVVPRDVVIT 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 125/490 (26%)
Cyp3a41aNP_059092.2 p450 39..494 CDD:278495 126/501 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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