DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp6a20

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_611002.3 Gene:Cyp6a20 / 36664 FlyBaseID:FBgn0033980 Length:501 Species:Drosophila melanogaster


Alignment Length:512 Identity:132/512 - (25%)
Similarity:240/512 - (46%) Gaps:42/512 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGV--TEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRN 67
            ||:|:.|.   :..::..:|.:|:|||:  .||: :| :|:...:: ...||....:..|...||
  Fly     7 LLIGVITF---VAWYVHQHFNYWKRRGIPHDEPK-IP-YGNTSELM-KTVHFADIFKRTYNKLRN 65

  Fly    68 THS--YVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEW 130
            ...  :||.|:.....::|.:......:.:..|..|.:..   :....:|..::.|...::|::|
  Fly    66 KTDGPFVGFYMYFKRMVVVTDIDFAKTVLIREFDKFHDRG---VFHNERDDPLSANLVNIDGQKW 127

  Fly   131 RHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQ-FIAIKSAGGKDLDCIDLGLRFTGESLFDCVLG 194
            :..|...:...|:|:::|....:..|..:|.: |....||....::..::..|||.:.:..|..|
  Fly   128 KTLRQKLTPTFTSGKMKTMFPTILTVGDELIRVFGETASADSDSMEITNVVARFTADVIGSCAFG 192

  Fly   195 IQARTFTDNPLPVVRQNHEMSAENR-----GLAIAGAVHGLFPNLPRWLRPKVFPRSHDRFYGQM 254
            :...:.:|.....|:.......|.|     .|.:.||     |.|...||.|...:..:.||..:
  Fly   193 LDCHSLSDPKAKFVQMGTTAITERRHGKSMDLLLFGA-----PELAAKLRMKATVQEVEDFYMNI 252

  Fly   255 ISEALRLRRSKHQERNDFINHLLEMQRELD-------LSEEDMASHAMTFMFDGLDTTSNSIAHC 312
            |.:.:..|...:.:|:||::.|:||:.:.|       |:..::|:.|..|...|.:|:|.::...
  Fly   253 IRDTVDYRVKNNVKRHDFVDMLIEMKLKFDNGDKENGLTFNEIAAQAFIFFLAGFETSSTTMGFA 317

  Fly   313 LLLLGRNPDCQRRLYEELQLV--NPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKE 375
            |..|..:.|.|.:|..|:..|  ...|.| |.|::.::.||....:|::|..|..|...:..|:.
  Fly   318 LYELACHQDIQDKLRTEINTVLKQHNGKL-DYDSMREMTYLEKVIDETMRKRPVVGHLIRVATQH 381

  Fly   376 YELRGSHHSEP-LKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGN 439
            |:     |:.| ..:..|..|:||..|:|:||:.||||:.|.||||.:..::. :....||.||:
  Fly   382 YQ-----HTNPKYNIEKGTGVIVPTLAIHHDPEFYPEPEKFIPERFDEDQVQQ-RPACTFLPFGD 440

  Fly   440 GPRQCVGMRLGLAMAKAALAAIVQRFEVVVSP-RTLNGTELDPLIFVGVHKGGIWLQ 495
            |||.|:|:|.|.......:|.::..|:....| :|:...|.....|:...||||.|:
  Fly   441 GPRNCIGLRFGRMQVIVGMALLIHNFKFEFHPTKTVVPLEYRTDDFLLSSKGGIHLK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 117/470 (25%)
Cyp6a20NP_611002.3 p450 32..496 CDD:278495 122/481 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I2119
eggNOG 1 0.900 - - E2759_KOG0158
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.970

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