DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28c1 and Cyp6g1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001286335.1 Gene:Cyp6g1 / 36316 FlyBaseID:FBgn0025454 Length:524 Species:Drosophila melanogaster


Alignment Length:526 Identity:140/526 - (26%)
Similarity:238/526 - (45%) Gaps:53/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYR-NT 68
            :|..:...|.|:|.:...|..:|:|:|:......|:.|:...:......|.|.:.:||...| ..
  Fly     6 VLFVVVAALVALYTWFQRNHSYWQRKGIPYIPPTPIIGNTKVVFKMENSFGMHLSEIYNDPRLKD 70

  Fly    69 HSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRHQ 133
            .:.||.|.:..|.|::.:..|:..|.:..|:.|.|..|  ..|...|.|...|.|.:....|:..
  Fly    71 EAVVGIYSMNKPGLIIRDIELIKSILIKDFNRFHNRYA--RCDPHGDPLGYNNLFFVRDAHWKGI 133

  Fly   134 RAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKD-----LDCIDLGLRFTGESLFDCVL 193
            |...:.:.|:|:::..:.:||.:..||  .:|::..|.|:     .:..::..:|:.:|:.....
  Fly   134 RTKLTPVFTSGKVKQMYTLMQEIGKDL--ELALQRRGEKNSGSFITEIKEICAQFSTDSIATIAF 196

  Fly   194 GIQARTFTDNPLPVVRQNHEMSAENRGL---AIAGA----VHGLFPNLPRWLRPKVFPRSHDRFY 251
            ||:|.:. :||      |.|.....|.:   .:|.|    |....|.|...:|.:.|......|.
  Fly   197 GIRANSL-ENP------NAEFRNYGRKMFTFTVARAKDFFVAFFLPKLVSLMRIQFFTADFSHFM 254

  Fly   252 GQMISEALRLRRSKHQERNDFINHLLEMQRELDL---------SEEDMASHAMTFMFDGLDTTSN 307
            ...|...:..|......|||.|:.|:.:::|...         :::.:.:.|..|...|.:|:|:
  Fly   255 RSTIGHVMEERERSGLLRNDLIDVLVSLRKEAAAEPSKPHYAKNQDFLVAQAGVFFTAGFETSSS 319

  Fly   308 SIAHCLLLLGRNPDCQRRLYEELQ--LVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASK 370
            :::..|..:.::|:.|:||.:|:.  ||..||.| ..:.:..|.||:...:|.||:||...:.. 
  Fly   320 TMSFALYEMAKHPEMQKRLRDEINEALVEGGGSL-SYEKIQSLEYLAMVVDEVLRMYPVLPFLD- 382

  Fly   371 TCTKEYELRGSHHSEP-LKLRP--------GDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLK 426
               :|||   |...:| |.|:|        |..|.:||||||:||..:..|..|.||||.....|
  Fly   383 ---REYE---SVEGQPDLSLKPFYDYTLENGTPVFIPIYALHHDPKYWTNPSQFDPERFSPANRK 441

  Fly   427 NCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPLIFVGVHKGG 491
            |..... :..||:||..|:|.|:||..:|..|.::::...|.....|:...:.||..||....||
  Fly   442 NIVAMA-YQPFGSGPHNCIGSRIGLLQSKLGLVSLLKNHSVRNCEATMKDMKFDPKGFVLQADGG 505

  Fly   492 IWLQFV 497
            |.|:.|
  Fly   506 IHLEIV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 127/484 (26%)
Cyp6g1NP_001286335.1 p450 56..508 CDD:278495 127/471 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460809
Domainoid 1 1.000 88 1.000 Domainoid score I2119
eggNOG 1 0.900 - - E2759_KOG0158
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

Return to query results.
Submit another query.