DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp28c1 and Cyp6a13

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_610390.1 Gene:Cyp6a13 / 35837 FlyBaseID:FBgn0033304 Length:493 Species:Drosophila melanogaster


Alignment Length:476 Identity:139/476 - (29%)
Similarity:231/476 - (48%) Gaps:20/476 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQ-HFT-MDMRDIYMHYR 66
            :||:.:.|:...:|..|..::.:|.||||...|.:...|:...:  .|. |:| :::| ||..:|
  Fly     3 TLLVLVFTVGLLLYVKLRWHYSYWSRRGVAGERPVYFRGNMSGL--GRDLHWTDINLR-IYRKFR 64

  Fly    67 NTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWR 131
            ....|.|.:......|.:::..|:.:|.:..||.|.  |.....::..|.|.. |...|:|.|||
  Fly    65 GVERYCGYFTFMTKSLFIMDLELIRDIMIRDFSSFA--DRGLFHNVRDDPLTG-NLLFLDGPEWR 126

  Fly   132 HQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQ 196
            ..|...:.:.|:|:::.....|..|...|.|...::..   :::..||..|||.:.:..|..|::
  Fly   127 WLRQNLTQVFTSGKMKFMFPNMVEVGEKLTQACRLQVG---EIEAKDLCARFTTDVIGSCAFGLE 188

  Fly   197 ARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKVFPRSHDRFYGQMISEALRL 261
            ..:..|......|....::.|.....:..|.....|.|.|.||.::|......|:...:.:.|..
  Fly   189 CNSLQDPESQFRRMGRSVTQEPLHSVLVQAFMFAQPELARKLRFRLFRPEVSEFFLDTVRQTLDY 253

  Fly   262 RRSKHQERNDFINHLLEMQRE--LD-LSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQ 323
            ||.::..|||.|..|:|:..|  .| ||.|.:|:.|:.|...|.||:|.:::.||..|..|||.|
  Fly   254 RRRENIHRNDLIQLLMELGEEGVKDALSFEQIAAQALVFFLAGFDTSSTTMSFCLYELALNPDVQ 318

  Fly   324 RRL-YEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEYELRGSHHSEPL 387
            .|| .|.|.::.........|::.::|||.....|:||.||......:..||||::..|:    |
  Fly   319 ERLRVEVLAVLKRNNQKLTYDSVQEMPYLDQVVAETLRKYPILPHLLRRSTKEYQIPNSN----L 379

  Fly   388 KLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLA 452
            .|.||..:::|::::|:||:|||:|:.|.|.||....:| .:....:|.||.|||.|:|.|.|..
  Fly   380 ILEPGSKIIIPVHSIHHDPELYPDPEKFDPSRFEPEEIK-ARHPFAYLPFGEGPRNCIGERFGKL 443

  Fly   453 MAKAALAAIVQRFEVVVSPRT 473
            ..|..|..:::.|:...|.:|
  Fly   444 QVKVGLVYLLRDFKFSRSEKT 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 129/445 (29%)
Cyp6a13NP_610390.1 p450 33..476 CDD:278495 129/446 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460928
Domainoid 1 1.000 88 1.000 Domainoid score I2119
eggNOG 1 0.900 - - E2759_KOG0158
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

Return to query results.
Submit another query.