DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp6w1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001286145.1 Gene:Cyp6w1 / 35543 FlyBaseID:FBgn0033065 Length:514 Species:Drosophila melanogaster


Alignment Length:517 Identity:136/517 - (26%)
Similarity:225/517 - (43%) Gaps:46/517 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIY--MHYRN 67
            ||||..|::  .|.:.......|.|.||...|..|:.|.....:..:..|...::..:  ..:.|
  Fly     5 LLLGSLTIV--FYIWQRRTLSFWERHGVKYIRPFPVVGCTREFLTAKVPFFEQIQKFHEAPGFEN 67

  Fly    68 THSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRH 132
             ..:||.|:...|.|::.:..|:..:.:..|.:|  |:.....|...|.|...|.|......||.
  Fly    68 -EPFVGVYMTHRPALVIRDLELIKTVMIKKFQYF--NNRVLQTDPHNDALGYKNLFFARSPGWRE 129

  Fly   133 QRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQA 197
            .|...|.:.|:|:|:..:.:|.::..:| |..|.:...|.::...||..|||.:.:.....|::|
  Fly   130 LRTKISPVFTSGKIKQMYPLMVKIGKNL-QDSAERLGSGTEVQVKDLCSRFTTDLIATIAFGVEA 193

  Fly   198 RTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKVFPRSHDRFYGQMISEALRLR 262
            ....|........|..:.:......|..|:..:.|.|....|.|:|.|...:|....::..|:.|
  Fly   194 NALQDAKSEFFYHNRAIFSLTLSRGIDFAIIFMIPALASLARVKLFSRETTKFIRSSVNYVLKER 258

  Fly   263 RSKHQERNDFINHLL-----------EMQRELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLLLL 316
            ....::|||.|:.||           :|.:|:||  :.:.:.|..|...|.:|:::::...|..|
  Fly   259 ERTGEKRNDLIDILLALKREAAANPGKMSKEVDL--DYLVAQAAVFQTAGFETSASTMTMTLYEL 321

  Fly   317 GRNPDCQRRLYEELQLVNPGGYLPDLD-----ALIDLPYLSACFNESLRIYPAGGWASKTCTKEY 376
            .:|...|.||.:|:.     .:..|.|     .:.::||||...||:||.||..|:..:.|::..
  Fly   322 AKNEALQDRLRQEIV-----DFFGDEDHISYERIQEMPYLSQVVNETLRKYPIVGYIERECSQPA 381

  Fly   377 ELRGSHHSEPLKLRPGDHVMVP----IY----ALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGI 433
            |      .|...|.|..::.:|    ||    |:|.||..:|:|:.:.||||......|..... 
  Fly   382 E------GERFTLEPFHNMELPHGMSIYMSTVAVHRDPQYWPDPEKYDPERFNSSNRDNLNMDA- 439

  Fly   434 FLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPLIFVGVHKGGIWLQ 495
            ::.||.|||.|:||||||..:|..|..|::........:|:...|..|...|...|..|.|:
  Fly   440 YMPFGVGPRNCIGMRLGLLQSKLGLVHILRNHRFHTCDKTIKKIEWAPTSPVMASKRDIILR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 123/477 (26%)
Cyp6w1NP_001286145.1 p450 34..501 CDD:278495 125/484 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460812
Domainoid 1 1.000 88 1.000 Domainoid score I2119
eggNOG 1 0.900 - - E2759_KOG0158
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I1773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.900

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