DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp3a44

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_796354.1 Gene:Cyp3a44 / 337924 MGIID:2449818 Length:504 Species:Mus musculus


Alignment Length:544 Identity:135/544 - (24%)
Similarity:236/544 - (43%) Gaps:84/544 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFGSL----LLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNM---IWPRQHFTMDM 58
            :|.:|    |:.:|.:|..:|.:.....|.::::|:..|:.||..|:..|.   ||     ..||
Mouse     3 LFSALSLDTLVLLAIILVLLYRYGTRTHGLFKKQGIPGPKPLPFLGTVLNYYTGIW-----KFDM 62

  Fly    59 RDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENND-------ASKMVDIAKD 115
             :.|..|..|.   |.:..:.|.|::.:|..:..:.| ...|.|.|..       .||.:.|:||
Mouse    63 -ECYEKYGKTW---GLFDGQTPLLVITDPETIKNVLVKDCLSVFTNRREFGPVGIMSKAISISKD 123

  Fly   116 RLVALNPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLG 180
                        |||:..||:.|...|:||::....::::....|.:::..::..|..:...|:.
Mouse   124 ------------EEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQEAEKGMPVAMKDVL 176

  Fly   181 LRFTGESLFDCVLGIQARTFTDNPLPVVRQNHE-MSAENRGLAIAGAVHGLFPNLP---RWLRPK 241
            ..::.:.:.....|:...:..:...|.|.:..: :..:.....:...|  |||.|.   ..|...
Mouse   177 GAYSMDVITSTSFGVNVDSLNNPEDPFVEEAKKFLRVDFFDPLLFSVV--LFPLLTPVYEMLNIC 239

  Fly   242 VFPRSHDRFYGQMISEALRLRRSKHQE-RNDFINHLLEMQRELDLSEEDMASH-----------A 294
            :||.....|:.:.:......|...:|: |.||:..::....    :.:|..||           :
Mouse   240 MFPNDSIEFFKKFVDRMQESRLDSNQKHRVDFLQLMMNSHN----NSKDKDSHKAFSNMEITVQS 300

  Fly   295 MTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESL 359
            :.|:..|.:|||::::..|..|..:||.|::|..|:....|....|..|.::::.||....||:|
Mouse   301 IIFISAGYETTSSTLSFTLYCLATHPDIQKKLQAEIDKALPNKATPTCDTVMEMEYLDMVLNETL 365

  Fly   360 RIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGG 424
            |:||......:.|.|:.||.|.:      :..|..||:|.||||:||..:|:|:.|:||||....
Mouse   366 RLYPIVTRLERVCKKDVELNGVY------IPKGSMVMIPSYALHHDPQHWPDPEEFQPERFSKEN 424

  Fly   425 LKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELD--------- 480
             |......::|.||.|||.|:|||..|...|.|:..::|.|.......|....:|.         
Mouse   425 -KGSIDPYVYLPFGIGPRNCIGMRFALMNMKLAVTKVLQNFSFQPCQETQIPLKLSRQGILQPEK 488

  Fly   481 PLIFVGVHKGGIWLQFVPRKNVTT 504
            |::          |:.|||..|.|
Mouse   489 PIV----------LKVVPRDAVIT 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 121/487 (25%)
Cyp3a44NP_796354.1 p450 39..494 CDD:278495 122/498 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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