DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp3a2

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_695224.3 Gene:Cyp3a2 / 266682 RGDID:708379 Length:504 Species:Rattus norvegicus


Alignment Length:480 Identity:126/480 - (26%)
Similarity:218/480 - (45%) Gaps:53/480 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHSYVG 73
            :|.:|..:|.......|.::::|:..|:.||..|:..|.......|.|:.      |:......|
  Rat    15 LAVILVLLYRLGTHRHGIFKKQGIPGPKPLPFLGTVLNYYKGLGRFDMEC------YKKYGKIWG 73

  Fly    74 CYLLRAPKLLVLEPRLVYEIYV-SAFSHFENND-------ASKMVDIAKDRLVALNPFVLEGEEW 130
            .:..:.|...:::..::..:.| ..||.|.|..       ..|.|.:|||            |||
  Rat    74 LFDGQTPVFAIMDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAVSVAKD------------EEW 126

  Fly   131 RHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGI 195
            :..||:.|...|:||::....|:::....|.:::..::..||.:....:...::.:.:.....|:
  Rat   127 KRYRALLSPTFTSGRLKEMFPIIEQYGDILVKYLKQEAETGKPVTMKKVFGAYSMDVITSTSFGV 191

  Fly   196 QARTFTDNPLPVVRQNHEMSA----ENRGLAIAGAVHGLFPNLP---RWLRPKVFPRSHDRFYGQ 253
            ...:..:...|.|.:..::..    :...|::.     |||.|.   ..|...:||:....|:.:
  Rat   192 NVDSLNNPKDPFVEKTKKLLRFDFFDPLFLSVV-----LFPFLTPIYEMLNICMFPKDSIAFFQK 251

  Fly   254 MISEALRLR-RSKHQERNDFINHLLEMQRELD-------LSEEDMASHAMTFMFDGLDTTSNSIA 310
            .:......| .|||:.|.||:..:|.......       ||:.::.:.::.|:|.|.:|||::::
  Rat   252 FVHRIKETRLDSKHKHRVDFLQLMLNAHNNSKDEVSHKALSDVEIIAQSVIFIFAGYETTSSTLS 316

  Fly   311 HCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKE 375
            ..|..|..:||.|::|.||:....|....|..|.::::.||....||:||:||.|....:.|.|:
  Rat   317 FVLYFLATHPDIQKKLQEEIDGALPSKAPPTYDIVMEMEYLDMVLNETLRLYPIGNRLERVCKKD 381

  Fly   376 YELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNG 440
            .||.|      |.:..|..|.:|.||||:||..:|:|:.|.||||.... |......::|.||||
  Rat   382 IELDG------LFIPKGSVVTIPTYALHHDPQHWPKPEEFHPERFSKEN-KGSIDPYVYLPFGNG 439

  Fly   441 PRQCVGMRLGLAMAKAALAAIVQRF 465
            ||.|:|||..|...|.||..::|.|
  Rat   440 PRNCIGMRFALMNMKLALTKVLQNF 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 121/454 (27%)
Cyp3a2NP_695224.3 CYP3A 67..493 CDD:410743 113/422 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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