DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp3a18

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:483 Identity:125/483 - (25%)
Similarity:221/483 - (45%) Gaps:44/483 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNM---IWPRQHFTMDMRDIYMHYRNTHS 70
            :||.|...|.:...:.|.:::.|:..|:.:||||:..|.   :|   .|..|.      |:....
  Rat    15 LATSLMLFYIYGTYSHGLFKKLGIPGPKPVPLFGTIFNYGDGMW---KFDDDC------YKKYGK 70

  Fly    71 YVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRHQR 134
            ..|.|....|.|.:::|.::..:.| ..:|.|.|......:...|..:.     :.|.|||:..|
  Rat    71 IWGFYEGPQPFLAIMDPEIIKMVLVKECYSVFTNRRCFGPMGFMKKAIT-----MSEDEEWKRLR 130

  Fly   135 AVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQART 199
            .:.|...|:|:::....:|::....|.:.:..:.|.|:.::..|:...::.:.:.....|:...:
  Rat   131 TILSPTFTSGKLKEMFPLMRQYGDTLLKNLRREEAKGEPINMKDIFGAYSMDVITGTSFGVNVDS 195

  Fly   200 FTDNPLPVVRQNHEMSA----ENRGLAIAGAVHGLFPNLP---RWLRPKVFPRSHDRFYGQMISE 257
            ..:...|.|::..::..    :...|::.     |||.|.   ..|...:|||....|:.:.:..
  Rat   196 LNNPQDPFVQKAKKILKFQIFDPFLLSVV-----LFPFLTPIYEMLNFSIFPRQSMNFFKKFVKT 255

  Fly   258 ALRLRRSKHQE-RNDFINHLLEMQR------ELDLSEEDMASHAMTFMFDGLDTTSNSIAHCLLL 315
            ..:.|...:|: |.||:..::..|.      :..||:.:||:.|:.|:|.|.|.||.||:..:..
  Rat   256 MKKNRLDSNQKSRVDFLQLMMNTQNSKGQESQKALSDLEMAAQAIIFIFGGYDATSTSISFIMYE 320

  Fly   316 LGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEYELRG 380
            |...|:.|::|..|:....|.......|||:::.||....|||||:||......:...|:.|:.|
  Rat   321 LATRPNVQKKLQNEIDRALPNKAPVTYDALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEING 385

  Fly   381 SHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCV 445
                  :.:..|..|.:|||.||.:|:.:.||:.|.||||.... |......::|.||||||.|:
  Rat   386 ------VFIPKGTVVTIPIYPLHRNPEYWLEPEEFNPERFSKEN-KGSIDPYVYLPFGNGPRNCI 443

  Fly   446 GMRLGLAMAKAALAAIVQRFEVVVSPRT 473
            |||..|...|.|:..::|.|.:....:|
  Rat   444 GMRFALISMKLAVIGVLQNFNIQPCEKT 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 119/457 (26%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 109/422 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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