DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:533 Identity:137/533 - (25%)
Similarity:243/533 - (45%) Gaps:77/533 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHSYVGCYLLRA 79
            |::::.:..:..||||||..|...|:.|.|.|.:.....|.:..|:....:...:.:....|   
 Worm    15 AVFSYYIWQWTFWRRRGVVGPMGFPVLGVFLNSLDNNFPFPLQCREWTKKFGKIYGFTEGTL--- 76

  Fly    80 PKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVALNPFVLEGEEWRHQRAVFSTLLTN 143
            ..|::.:|.||:|::|:.:.:|.....:.:. |..|::  ..|.|..:|..|:..||:.|...:|
 Worm    77 KTLVISDPELVHEVFVTQYDNFYGRKRNPIQGDSEKEK--RTNLFAAQGFRWKRLRAISSPTFSN 139

  Fly   144 GRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQARTFTD-----N 203
            ..:|..:..::...|:|.:.|..:|||||.:|.    |:|..|...| |:|..|...||     |
 Worm   140 SSLRKLYQTVEDSALELLRHIEKQSAGGKQIDM----LKFYQEFTLD-VIGRIAMGQTDSQMFKN 199

  Fly   204 P-LPVVRQNHEMSAENRGLAIAGAVHGLFP----NLPRWLRPKVFPRSHDRFYGQMISEAL--RL 261
            | :|:|.:..:     ...|....:.|:||    .:.|.:..|.......|...::..:|:  |:
 Worm   200 PIMPIVSKLFQ-----GNFAKLFLIGGIFPTFLVEIIRQILLKNLKVGSFRKINEITLDAIHNRI 259

  Fly   262 RRSKHQERN--------DFINHLLEMQRE--------------------LDLSEEDMASHAMTFM 298
            ::.:..::|        |||:..|:.:.|                    ..|:.|::......|:
 Worm   260 KQREEDQKNGIEIGEPADFIDLFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFL 324

  Fly   299 FDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPD--LDALIDLPYLSACFNESLRI 361
            ..|.|||:.|:::...||..:|:.|::|.||:....|.   |:  :|.|..|.|:...|.|:||:
 Worm   325 IAGFDTTALSLSYATYLLATHPEIQKKLQEEVNRECPN---PEVTIDQLSKLKYMECVFKEALRL 386

  Fly   362 YPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLY-PEPDVFRPERFLDGG 424
            ||.|.:| |:.|.:..:|..      :|:..|..:.|..:.||.||::: .:.:.|:|||:....
 Worm   387 YPLGAFANSRRCMRNTKLGN------MKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPN 445

  Fly   425 LKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPLIFVG--- 486
            .....|:..::.||.|||||:||||.....|..|..|:::|......:    ||: ||..:|   
 Worm   446 SDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKILLVHILRKFTFETGAK----TEI-PLKLIGRAT 505

  Fly   487 VHKGGIWLQFVPR 499
            .....:|:...||
 Worm   506 TQPESVWMHLNPR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 127/499 (25%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 120/474 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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