DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A2

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496109.1 Gene:cyp-13A2 / 188360 WormBaseID:WBGene00011676 Length:515 Species:Caenorhabditis elegans


Alignment Length:554 Identity:149/554 - (26%)
Similarity:245/554 - (44%) Gaps:114/554 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFG--------SFPNMI----WPRQHFTM 56
            |:.|||.|....|:.:       |.|:||..||..|..|        ..|.:|    |.:::   
 Worm    12 SIFLGILTYYLWIWTY-------WMRKGVKGPRGRPFVGVLDVLLEHETPGLIKLGEWTKKY--- 66

  Fly    57 DMRDIYMHYRNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVAL 120
              ..:|.:...|..          .|:|.:|.:|:||:|..|.:|.....:.:. :..|::.|.|
 Worm    67 --GKVYGYTDGTQR----------TLVVADPAMVHEIFVKQFDNFYGRKLNPIQGNPEKEQRVHL 119

  Fly   121 NPFVLEGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTG 185
              ...:|..|:..|.:.|...:|..::.....::...|:|.:.|..::|||:.:|.    |||..
 Worm   120 --LAAQGYRWKRLRTISSQSFSNASLKKMKRTVEDSALELLRHIEKQTAGGEQIDM----LRFYQ 178

  Fly   186 ESLFDCVLGIQARTFTD-----NPL-PVVRQNHEMSAENRGLAIAGAVHGLFPNLPRWLRPKV-- 242
            |...| |:|..|...||     ||: .|||:....|.:|..|     :..:||.:.:::|...  
 Worm   179 EYTMD-VIGRFAMGQTDSMMFKNPIVNVVREIFCGSRKNLML-----ICQVFPPIGQFIRDLTFK 237

  Fly   243 FPR-SHDRFYGQM-------ISEALRLRRSKHQERNDFINHLLE----------------MQREL 283
            ||| ...:.|..|       |::..|.:.::..|..|||:..|:                .:|.|
 Worm   238 FPRIPAFKLYSIMQDVVAARIAQREREKGAESGEPQDFIDLFLDARSDDVDFSAEAREDFSKRNL 302

  Fly   284 ----DLSEEDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDA 344
                :||.:::......|:..|.|||:.|:::...||..||..|.::.||:.. ..|....:.:.
 Worm   303 KITKELSADEVVGQCFLFLIGGFDTTALSLSYVTYLLAVNPKIQEKVIEEIAR-EFGTSEVEFEK 366

  Fly   345 LIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDL 408
            |..|.|:.....|:||:||....: |:.|.|...:.|      :|:..|.:|.:..::||.||:|
 Worm   367 LGRLKYMDCVIKEALRLYPLASISNSRKCMKTTTVNG------VKIEAGVYVQMDTWSLHYDPEL 425

  Fly   409 YPEPDV--FRPERF-LDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVS 470
            :.| ||  |:|||: .|..|::   :|.:|.||.|||||:||||.:...|..|..:::.:..   
 Worm   426 WGE-DVKEFKPERWSTDEPLEH---KGAYLPFGLGPRQCIGMRLAIMEQKILLTHLLKNYTF--- 483

  Fly   471 PRTLNGTELDPLIFVG----------VH-KGGIW 493
             .|.|.|.: ||..||          || :..||
 Worm   484 -ETGNKTRI-PLKLVGSATTSPEDVFVHLRPRIW 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 135/514 (26%)
cyp-13A2NP_496109.1 p450 35..511 CDD:278495 137/518 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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