DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp-13A3

DIOPT Version :9

Sequence 1:NP_001259464.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_496110.1 Gene:cyp-13A3 / 188359 WormBaseID:WBGene00011675 Length:520 Species:Caenorhabditis elegans


Alignment Length:535 Identity:133/535 - (24%)
Similarity:234/535 - (43%) Gaps:87/535 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFG---SFPNMIWPRQHFTMDMRDIYMHY 65
            |:|:.||..:| ::.:.:..:..|.|:|:..||.||.||   :|.:...|   :.:.:.|....|
 Worm     4 SILIAIALFIG-VFTYYLWIWSFWMRKGIKGPRGLPFFGIINAFQSYEKP---WILRLGDWTKEY 64

  Fly    66 RNTHSYVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMV-DIAKDRLVALNPFVLEGEE 129
            ...:.:....   ...|:|.:|..|:|::|..|.:|.....:.:. |..||..:.|  ...:|..
 Worm    65 GPMYGFTDGV---EKTLVVSDPEFVHEVFVKQFDNFYARKQNPLQGDPDKDPRIHL--VTSQGHR 124

  Fly   130 WRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLG 194
            |:..|.:.|...:|..:|...:.::....::.:.:...:||||.:|.::....||.:.:....:|
 Worm   125 WKRLRTLASPTFSNKSLRKIFSTVEESVAEMMRHLEKGTAGGKTIDILEYYQEFTMDIIGKIAMG 189

  Fly   195 IQARTFTDNP-LPVVRQNHEMSAENRGLAIAGAVHGLFP---NLPRWLRPKVFPRSHDRFYGQMI 255
            .......:|| |..:|    .....|| .|...:.|:.|   ::.||...|| |.:      |.:
 Worm   190 QSGSMMFENPWLDKIR----AIFNTRG-NIIFIICGIVPFTGSIFRWFFSKV-PTA------QTV 242

  Fly   256 S---EALRLRRSKHQER---------------NDFINHLLEMQRELDLSE--------------- 287
            :   ..|.:..:|..|:               .|||:..|::|.:.|..|               
 Worm   243 TSLMHTLEIALTKRVEQRAADEKAGIESSGEPQDFIDLFLDVQADTDFLEDETKNGFARSQIVKV 307

  Fly   288 ------EDMASHAMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDL--DA 344
                  :::......|:..|.|||:.|:::...||.|:|:.|::|.||:....|.   |::  |.
 Worm   308 DKHLTFDEIIGQLFVFLLAGYDTTALSLSYSSYLLARHPEIQKKLQEEVDRECPD---PEVTFDQ 369

  Fly   345 LIDLPYLSACFNESLRIYPAGGWA-SKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDL 408
            |..|.|:.....|:||:||..... ::.|.|...:.|      :|:..|.:|....:.||.||..
 Worm   370 LSKLKYMECVIKETLRLYPLASIVHNRKCMKSTTVLG------MKIEEGTNVQADTWTLHYDPKF 428

  Fly   409 YPE-PDVFRPERFLDGGLKNCKQQGIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPR 472
            :.| .:.|:|||: :.|.:....:|.:|.||.|||.|:||||.....|..||.|::::    |..
 Worm   429 WGENANEFKPERW-ESGDEQAVAKGAYLPFGLGPRICIGMRLAYMEEKMLLAQILKKY----SLE 488

  Fly   473 TLNGTELDPLIFVGV 487
            |...|.: ||..||:
 Worm   489 TTFETHI-PLKLVGI 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_001259464.1 p450 35..487 CDD:299894 124/502 (25%)
cyp-13A3NP_496110.1 p450 33..512 CDD:278495 125/505 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28638
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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